Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_E02
         (796 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-P...    30   3.2  
AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-P...    30   3.2  
BT003637-1|AAO39641.1|  525|Drosophila melanogaster AT18606p pro...    29   5.5  
AE014134-1160|AAF52434.2|  492|Drosophila melanogaster CG11322-P...    29   5.5  
AY094842-1|AAM11195.1|  883|Drosophila melanogaster RE01745p pro...    29   9.7  
AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-P...    29   9.7  
AE014296-1380|AAF50480.2|  883|Drosophila melanogaster CG13676-P...    29   9.7  

>AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-PH,
           isoform H protein.
          Length = 1704

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/96 (20%), Positives = 47/96 (48%)
 Frame = +2

Query: 35  RTSSEVPAPRGRAGYVRLNDLQVLRADRGPKDFRAHPLNDSPAPLHPTSDLRPGSEPVQS 214
           + SS+  +P  ++     + +++LR  R  +D R+H  +   + + P  +    + P + 
Sbjct: 179 KASSKDDSPPKKSTSHIADSIELLRMQRAARDARSHNRSRERS-ISPDRNRERSAAPDRL 237

Query: 215 RGVPAVNTTTRHAAPPRGRPTDGSSRR*STTNDVGL 322
           +   ++++    +A    +P+   SRR STT+  G+
Sbjct: 238 QSSASMSSLDSASASASRQPSKAGSRRGSTTSATGV 273


>AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-PD,
           isoform D protein.
          Length = 2063

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/96 (20%), Positives = 47/96 (48%)
 Frame = +2

Query: 35  RTSSEVPAPRGRAGYVRLNDLQVLRADRGPKDFRAHPLNDSPAPLHPTSDLRPGSEPVQS 214
           + SS+  +P  ++     + +++LR  R  +D R+H  +   + + P  +    + P + 
Sbjct: 179 KASSKDDSPPKKSTSHIADSIELLRMQRAARDARSHNRSRERS-ISPDRNRERSAAPDRL 237

Query: 215 RGVPAVNTTTRHAAPPRGRPTDGSSRR*STTNDVGL 322
           +   ++++    +A    +P+   SRR STT+  G+
Sbjct: 238 QSSASMSSLDSASASASRQPSKAGSRRGSTTSATGV 273


>BT003637-1|AAO39641.1|  525|Drosophila melanogaster AT18606p
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 186 RSDVGCKGAGESFSGWALKSLGPRSALNTCRSLSLTY 76
           +S V C      F G+ ++SL P  +LN C  L+LTY
Sbjct: 276 KSSVPCLERHPKFYGF-VRSLSPSISLNMCHPLALTY 311


>AE014134-1160|AAF52434.2|  492|Drosophila melanogaster CG11322-PA
           protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 186 RSDVGCKGAGESFSGWALKSLGPRSALNTCRSLSLTY 76
           +S V C      F G+ ++SL P  +LN C  L+LTY
Sbjct: 243 KSSVPCLERHPKFYGF-VRSLSPSISLNMCHPLALTY 278


>AY094842-1|AAM11195.1|  883|Drosophila melanogaster RE01745p
           protein.
          Length = 883

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = +3

Query: 225 PRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAV------RRPYQAARAVPLVFRDTP 383
           PR   + + RR   + RP GRR   +  TT  SA+       +PY +A  V      TP
Sbjct: 334 PRKPGRVEERRSFNEDRPLGRRRSEKERTTPSSALDDLDEYEKPYNSADQVEAAEEQTP 392


>AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-PA
            protein.
          Length = 2977

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 309  TTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGS 410
            TT++SA  +P+Q      LV    P+ Q QP G+
Sbjct: 1667 TTTMSASIQPFQTTSGTKLVGVTVPMQQQQPTGT 1700


>AE014296-1380|AAF50480.2|  883|Drosophila melanogaster CG13676-PA
           protein.
          Length = 883

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = +3

Query: 225 PRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAV------RRPYQAARAVPLVFRDTP 383
           PR   + + RR   + RP GRR   +  TT  SA+       +PY +A  V      TP
Sbjct: 334 PRKPGRVEERRSFNEDRPLGRRRSEKERTTPSSALDDLDEYEKPYNSADQVEAAEEQTP 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,639,517
Number of Sequences: 53049
Number of extensions: 620376
Number of successful extensions: 2644
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2628
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)