Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_D15
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0921 - 29431812-29432786                                         36   0.029
07_03_0164 + 14616156-14616225,14616409-14616477,14617672-146179...    30   2.5  
10_07_0138 + 13325418-13325954                                         29   3.3  
08_01_0277 - 2262557-2264128                                           29   3.3  
08_01_0275 + 2249794-2251338                                           29   4.3  
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582...    29   4.3  
09_02_0248 + 6230816-6231204,6231287-6231374,6234809-6235073,623...    28   10.0 
06_03_1468 - 30354724-30354945,30359326-30359497,30359587-303597...    28   10.0 

>04_04_0921 - 29431812-29432786
          Length = 324

 Score = 36.3 bits (80), Expect = 0.029
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 309 GARVGWSIWRGRCSSGW*PRRRC-SYRWWSFVDSRIIDLWIANHTYEERTFVG*SGTI 479
           GAR  W+ W G CSSG     RC   RWWS    R    W+++     R F    GT+
Sbjct: 141 GAR--WAAWAGLCSSGRCAWLRCGGSRWWSAAGGR----WLSSSWPRRRLFSAGRGTV 192


>07_03_0164 +
           14616156-14616225,14616409-14616477,14617672-14617902,
           14618394-14618557,14618795-14618935,14619632-14619691,
           14620358-14620522,14620676-14620732,14621084-14621148,
           14622235-14622358,14622469-14622606,14622705-14622830
          Length = 469

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 626 RFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
           +FV+RF V A       ++ AW ++ D AT++L
Sbjct: 433 KFVLRFAVGAPLTEERHVDAAWKLLRDEATKVL 465


>10_07_0138 + 13325418-13325954
          Length = 178

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = +3

Query: 333 WRGRCSSGW---*PRRRCSYRW 389
           WR RCS  W     RRRCS RW
Sbjct: 97  WRSRCSRRWRRSWRRRRCSRRW 118


>08_01_0277 - 2262557-2264128
          Length = 523

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL--EGPDK 513
           K ++    V  RFV+RF V +       +  AW++I    TE++   G DK
Sbjct: 473 KAYVAHTVVGGRFVLRFAVGSSLQEERHVRSAWELIKKTTTEIVADAGEDK 523


>08_01_0275 + 2249794-2251338
          Length = 514

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
           K ++    V  RFV+RF V +       +  AW++I    TE++
Sbjct: 470 KAYVAHTVVGGRFVLRFAVGSSLQEEHHVRSAWELIKKTTTEMM 513


>02_01_0782 +
           5827364-5827441,5827733-5827787,5828761-5828849,
           5829167-5829191,5829645-5829683,5830316-5830433,
           5830857-5831023,5831155-5831518,5831589-5831701,
           5832185-5832310,5832436-5833339,5833694-5834036
          Length = 806

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 167 GASRRGSTPCASPEHRASSPSNNH 96
           G SRR  +  ASP  RA SP+ NH
Sbjct: 619 GRSRRSVSRSASPPRRAISPAQNH 642


>09_02_0248 +
           6230816-6231204,6231287-6231374,6234809-6235073,
           6235222-6235298
          Length = 272

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 106 EGDEARCSGEAH---GVEPRRLAPGLFNLT 186
           E  +AR S   H   G  P+ LAPG+FNL+
Sbjct: 145 ESPDARSSSWRHSLLGCSPKDLAPGIFNLS 174


>06_03_1468 -
           30354724-30354945,30359326-30359497,30359587-30359770,
           30359865-30360111,30360817-30362052
          Length = 686

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 590 ATREDI-EVAWDIISDFATELLEGPDKERDLNEERTRR 480
           A R D+ E++ D ISD    ++ GP+K+  +  E  RR
Sbjct: 452 AARRDLKEISKDEISDALERIIAGPEKKNAVVSEEKRR 489


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,378,192
Number of Sequences: 37544
Number of extensions: 434533
Number of successful extensions: 1289
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)