Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_D15
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54297-1|CAA38196.1| 662|Homo sapiens protein ( Human mRNA for ... 46 2e-04
M60445-1|AAC41698.1| 662|Homo sapiens histidine decarboxylase p... 46 2e-04
D16583-1|BAA04015.1| 662|Homo sapiens L-histidine decarboxylase... 46 2e-04
BC130527-1|AAI30528.1| 662|Homo sapiens histidine decarboxylase... 46 2e-04
CR456724-1|CAG33005.1| 480|Homo sapiens DDC protein. 41 0.005
M88700-1|AAA20894.1| 480|Homo sapiens dopa decarboxylase protein. 41 0.006
M84592-1|AAD40482.1| 480|Homo sapiens aromatic decarboxylase pr... 41 0.006
M76180-1|AAA58437.1| 480|Homo sapiens aromatic amino acid decar... 41 0.006
BT007009-1|AAP35655.1| 480|Homo sapiens dopa decarboxylase (aro... 41 0.006
BC008366-1|AAH08366.1| 480|Homo sapiens dopa decarboxylase (aro... 41 0.006
BC000485-1|AAH00485.1| 480|Homo sapiens dopa decarboxylase (aro... 41 0.006
AY526322-1|AAS00092.1| 480|Homo sapiens dopa decarboxylase (aro... 41 0.006
AC018705-2|AAS01995.1| 480|Homo sapiens unknown protein. 41 0.006
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 30 8.5
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 30 8.5
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 30 8.5
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 30 8.5
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 30 8.5
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 30 8.5
BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein. 30 8.5
BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein. 30 8.5
BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein. 30 8.5
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 30 8.5
AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor, n... 30 8.5
>X54297-1|CAA38196.1| 662|Homo sapiens protein ( Human mRNA for
histidine decarboxylase (EC 4.1.1.22). ).
Length = 662
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
+L ++PA+++++ +IRF V +Q TR+DI W++I D AT +L
Sbjct: 432 RLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 475
>M60445-1|AAC41698.1| 662|Homo sapiens histidine decarboxylase
protein.
Length = 662
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
+L ++PA+++++ +IRF V +Q TR+DI W++I D AT +L
Sbjct: 432 RLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 475
>D16583-1|BAA04015.1| 662|Homo sapiens L-histidine decarboxylase
protein.
Length = 662
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
+L ++PA+++++ +IRF V +Q TR+DI W++I D AT +L
Sbjct: 432 RLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 475
>BC130527-1|AAI30528.1| 662|Homo sapiens histidine decarboxylase
protein.
Length = 662
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
+L ++PA+++++ +IRF V +Q TR+DI W++I D AT +L
Sbjct: 432 RLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 475
>CR456724-1|CAG33005.1| 480|Homo sapiens DDC protein.
Length = 480
Score = 41.1 bits (92), Expect = 0.005
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELLEGPDKERD 504
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L ERD
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVLRA---ERD 480
>M88700-1|AAA20894.1| 480|Homo sapiens dopa decarboxylase protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>M84592-1|AAD40482.1| 480|Homo sapiens aromatic decarboxylase
protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>M76180-1|AAA58437.1| 480|Homo sapiens aromatic amino acid
decarboxylase protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>BT007009-1|AAP35655.1| 480|Homo sapiens dopa decarboxylase
(aromatic L-amino acid decarboxylase) protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>BC008366-1|AAH08366.1| 480|Homo sapiens dopa decarboxylase
(aromatic L-amino acid decarboxylase) protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>BC000485-1|AAH00485.1| 480|Homo sapiens dopa decarboxylase
(aromatic L-amino acid decarboxylase) protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>AY526322-1|AAS00092.1| 480|Homo sapiens dopa decarboxylase
(aromatic L-amino acid decarboxylase) protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>AC018705-2|AAS01995.1| 480|Homo sapiens unknown protein.
Length = 480
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
K+H+VP +R++FV+RF + ++ ++ AW+ I + A ++L
Sbjct: 432 KIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 431 PQQPLEAEKASPHPSPGPCRPP 452
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 431 PQQPLEAEKASPHPSPGPCRPP 452
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 406 PQQPLEAEKASPHPSPGPCRPP 427
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 431 PQQPLEAEKASPHPSPGPCRPP 452
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 431 PQQPLEAEKASPHPSPGPCRPP 452
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 431 PQQPLEAEKASPHPSPGPCRPP 452
>BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 255 PQQPLEAEKASPHPSPGPCRPP 276
>BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 255 PQQPLEAEKASPHPSPGPCRPP 276
>BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein.
Length = 556
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 360 PQQPLEAEKASPHPSPGPCRPP 381
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 431 PQQPLEAEKASPHPSPGPCRPP 452
>AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 precursor variant
protein.
Length = 533
Score = 30.3 bits (65), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 169 PEQVVGAPRRAPHPNIGPRRPP 104
P+Q + A + +PHP+ GP RPP
Sbjct: 337 PQQPLEAEKASPHPSPGPCRPP 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,196,711
Number of Sequences: 237096
Number of extensions: 2296755
Number of successful extensions: 5518
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5517
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -