Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_D15
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF047651-8|AAV58886.1| 514|Caenorhabditis elegans Biogenic amin... 34 0.10
AF047651-7|AAC02721.2| 523|Caenorhabditis elegans Biogenic amin... 34 0.10
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 31 0.97
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72501-2|CAA96583.1| 260|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z92786-9|CAB07204.2| 687|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF106577-11|AAC78185.1| 322|Caenorhabditis elegans Hypothetical... 28 9.0
AF047651-9|AAC02720.2| 509|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
++HMVPAS+ +RFVIRFCV A++AT +DIEVA++II+ +L
Sbjct: 507 RIHMVPASLGDRFVIRFCVCAENATDKDIEVAYEIIAQATQHVL 550
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = -2
Query: 524 GPDKERDLNEER--TRRNRAALAHKRSFFVRMVSDPKIYNPAI 402
G ER L++E ++ +LA KRSF VRMVSDPK YNP I
Sbjct: 597 GQKLERQLSKEEILAQKQHESLAKKRSFLVRMVSDPKCYNPKI 639
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELL 528
++HMVPAS+ +RFVIRFCV A++AT +DIEVA++II+ +L
Sbjct: 507 RIHMVPASLGDRFVIRFCVCAENATDKDIEVAYEIIAQATQHVL 550
>AF047651-8|AAV58886.1| 514|Caenorhabditis elegans Biogenic amine
synthesis relatedprotein 1, isoform a protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATEL 531
++H+VP++V + +R V +Q T +DI A D+I + A +L
Sbjct: 471 RIHLVPSTVHGTYFLRMVVCSQLTTLDDIIYARDVIFELAEKL 513
>AF047651-7|AAC02721.2| 523|Caenorhabditis elegans Biogenic amine
synthesis relatedprotein 1, isoform b protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATEL 531
++H+VP++V + +R V +Q T +DI A D+I + A +L
Sbjct: 480 RIHLVPSTVHGTYFLRMVVCSQLTTLDDIIYARDVIFELAEKL 522
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 516 IRTL**LRSKVG-YYIPSNFNIFTCSVLSDHTETYHKTFPN 635
+ T+ LR +G + P NF+ S L+DH H+ FPN
Sbjct: 37 VSTMDQLRDTIGPFRDPLNFSHMNYSTLTDHIHNLHRKFPN 77
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 147 HAVRLTRTSGLVALQQSLNG 88
HA+RL R+ GL+ + Q+LNG
Sbjct: 568 HAIRLIRSGGLLIINQALNG 587
>Z72501-2|CAA96583.1| 260|Caenorhabditis elegans Hypothetical
protein C04C11.1a protein.
Length = 260
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +2
Query: 407 PDYRSLDR*PYVRRTNVCGLERHDCDEYVPRLDPFPYPDPLITP*QSRILYPKQLQYL 580
P++++ D YVR+T++ + D ++ ++ PYP + P R+ + + L L
Sbjct: 101 PEWKTTDS--YVRKTSILKTAKKDSHQHHHQVPAAPYPAGTLPPSSQRVEWREPLDCL 156
>Z92786-9|CAB07204.2| 687|Caenorhabditis elegans Hypothetical
protein F47H4.2 protein.
Length = 687
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 437 YVRRTNVCGLERHDCDEYVPRLDPF 511
Y R N C +E HD E+V RL+ F
Sbjct: 62 YRERDNGCVIENHDQQEFVDRLEFF 86
>AF106577-11|AAC78185.1| 322|Caenorhabditis elegans Hypothetical
protein F46F5.5 protein.
Length = 322
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 141 RRGAPTTCSGTLQPHHRVEMTKSQWQIV 224
RR AP+ GT Q HHR S Q+V
Sbjct: 104 RRQAPSDSKGTNQRHHRTPPASSSPQVV 131
>AF047651-9|AAC02720.2| 509|Caenorhabditis elegans Hypothetical
protein C05D2.3 protein.
Length = 509
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 659 KLHMVPASVRERFVIRFCVVAQHATREDIEVAWDIISDFATELLE 525
++H+ + V +V+RFCV + ED+ +I + A L E
Sbjct: 464 RIHLGISMVHGVYVLRFCVGSPLTNEEDVHFTKSVIFEIAHFLFE 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,151,223
Number of Sequences: 27780
Number of extensions: 363272
Number of successful extensions: 1022
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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