BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_D14
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02320-1|AAA36541.1| 583|Homo sapiens radixin protein. 35 0.38
BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein. 35 0.38
BC009239-1|AAH09239.1| 723|Homo sapiens leucine rich repeat and... 34 0.66
AY358830-1|AAQ89189.1| 723|Homo sapiens leucine-rich protein pr... 34 0.66
AL445222-17|CAH72931.1| 696|Homo sapiens leucine rich repeat an... 34 0.66
AL445222-16|CAH72930.1| 723|Homo sapiens leucine rich repeat an... 34 0.66
AK091589-1|BAC03703.1| 723|Homo sapiens protein ( Homo sapiens ... 34 0.66
AK056203-1|BAB71119.1| 696|Homo sapiens protein ( Homo sapiens ... 34 0.66
AB076364-1|BAD01551.1| 245|Homo sapiens keratin associated prot... 33 1.2
BC050058-1|AAH50058.1| 703|Homo sapiens SPECC1 protein protein. 33 1.5
BC033618-1|AAH33618.1| 481|Homo sapiens SPECC1 protein protein. 33 1.5
BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with calp... 33 1.5
AY816329-1|AAW30002.1| 1068|Homo sapiens structure protein NSP5b... 33 1.5
AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b... 33 1.5
AY816327-1|AAW30000.1| 987|Homo sapiens structure protein NSP5a... 33 1.5
AY816326-1|AAW29999.1| 709|Homo sapiens structure protein NSP5a... 33 1.5
AB041533-1|BAB16440.1| 759|Homo sapiens sperm antigen protein. 33 1.5
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 31 3.5
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 31 3.5
BC008496-1|AAH08496.1| 229|Homo sapiens coiled-coil domain cont... 31 3.5
AY598334-1|AAT06745.1| 229|Homo sapiens L15 protein. 31 3.5
AF155108-1|AAD42874.1| 241|Homo sapiens NY-REN-41 antigen protein. 31 3.5
AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated prot... 31 3.5
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 31 4.7
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 31 4.7
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein. 31 4.7
AF273047-1|AAG34907.1| 623|Homo sapiens CTCL tumor antigen se20... 31 4.7
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 31 4.7
AB076347-1|BAD01534.1| 282|Homo sapiens keratin associated prot... 31 4.7
BC131613-1|AAI31614.1| 292|Homo sapiens keratin associated prot... 31 6.1
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 31 6.1
BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated prot... 31 6.1
BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated prot... 31 6.1
BC052963-1|AAH52963.1| 1394|Homo sapiens SRCAP protein protein. 31 6.1
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 6.1
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 31 6.1
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 31 6.1
AB076356-1|BAD01543.1| 292|Homo sapiens keratin associated prot... 31 6.1
AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated prot... 31 6.1
AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated prot... 31 6.1
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 31 6.1
BC127016-1|AAI27017.1| 259|Homo sapiens KRTAP10-8 protein protein. 30 8.1
BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated prot... 30 8.1
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ... 30 8.1
BC022260-1|AAH22260.1| 400|Homo sapiens Unknown (protein for IM... 30 8.1
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr... 30 8.1
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein. 30 8.1
AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation ... 30 8.1
AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein. 30 8.1
AB076355-1|BAD01542.1| 259|Homo sapiens keratin associated prot... 30 8.1
AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated prot... 30 8.1
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein. 30 8.1
>L02320-1|AAA36541.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 34.7 bits (76), Expect = 0.38
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
+ RI K+ L E++KQ EEQ IKA ++L Q + +L + K
Sbjct: 337 KERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQERK 380
>BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 34.7 bits (76), Expect = 0.38
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
+ RI K+ L E++KQ EEQ IKA ++L Q + +L + K
Sbjct: 337 KERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQERK 380
>BC009239-1|AAH09239.1| 723|Homo sapiens leucine rich repeat and
sterile alpha motif containing 1 protein.
Length = 723
Score = 33.9 bits (74), Expect = 0.66
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = -2
Query: 574 KQNLQEQVKQTEE---QRI-KALQDLNRQKE--EMKKLSEGEKAKM 455
+Q LQEQ+KQTE+ RI K LQD RQK+ E+ K E E+ +M
Sbjct: 321 RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENERIRM 366
>AY358830-1|AAQ89189.1| 723|Homo sapiens leucine-rich protein
protein.
Length = 723
Score = 33.9 bits (74), Expect = 0.66
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = -2
Query: 574 KQNLQEQVKQTEE---QRI-KALQDLNRQKE--EMKKLSEGEKAKM 455
+Q LQEQ+KQTE+ RI K LQD RQK+ E+ K E E+ +M
Sbjct: 321 RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENERIRM 366
>AL445222-17|CAH72931.1| 696|Homo sapiens leucine rich repeat and
sterile alpha motif containing 1 protein.
Length = 696
Score = 33.9 bits (74), Expect = 0.66
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = -2
Query: 574 KQNLQEQVKQTEE---QRI-KALQDLNRQKE--EMKKLSEGEKAKM 455
+Q LQEQ+KQTE+ RI K LQD RQK+ E+ K E E+ +M
Sbjct: 321 RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENERIRM 366
>AL445222-16|CAH72930.1| 723|Homo sapiens leucine rich repeat and
sterile alpha motif containing 1 protein.
Length = 723
Score = 33.9 bits (74), Expect = 0.66
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = -2
Query: 574 KQNLQEQVKQTEE---QRI-KALQDLNRQKE--EMKKLSEGEKAKM 455
+Q LQEQ+KQTE+ RI K LQD RQK+ E+ K E E+ +M
Sbjct: 321 RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENERIRM 366
>AK091589-1|BAC03703.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ34270 fis, clone FEBRA2003100. ).
Length = 723
Score = 33.9 bits (74), Expect = 0.66
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = -2
Query: 574 KQNLQEQVKQTEE---QRI-KALQDLNRQKE--EMKKLSEGEKAKM 455
+Q LQEQ+KQTE+ RI K LQD RQK+ E+ K E E+ +M
Sbjct: 321 RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENERIRM 366
>AK056203-1|BAB71119.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ31641 fis, clone NT2RI2003695, weakly similar to
TRICHOHYALIN. ).
Length = 696
Score = 33.9 bits (74), Expect = 0.66
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = -2
Query: 574 KQNLQEQVKQTEE---QRI-KALQDLNRQKE--EMKKLSEGEKAKM 455
+Q LQEQ+KQTE+ RI K LQD RQK+ E+ K E E+ +M
Sbjct: 321 RQRLQEQLKQTEQNISSRIQKLLQDNQRQKKSSEILKSLENERIRM 366
>AB076364-1|BAD01551.1| 245|Homo sapiens keratin associated protein
protein.
Length = 245
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSARDFSAAVC 404
CC S + ++S+SL+C +CR AR C
Sbjct: 183 CCTTSCCRPSSSVSLLCRPVCRPARRVPVPSC 214
>BC050058-1|AAH50058.1| 703|Homo sapiens SPECC1 protein protein.
Length = 703
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 400 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 440
>BC033618-1|AAH33618.1| 481|Homo sapiens SPECC1 protein protein.
Length = 481
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 172 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 212
>BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with
calponin homology and coiled-coil domains 1 protein.
Length = 987
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 400 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 440
>AY816329-1|AAW30002.1| 1068|Homo sapiens structure protein NSP5b3b
protein.
Length = 1068
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 481 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 521
>AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b3a
protein.
Length = 790
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 481 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 521
>AY816327-1|AAW30000.1| 987|Homo sapiens structure protein NSP5a3b
protein.
Length = 987
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 400 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 440
>AY816326-1|AAW29999.1| 709|Homo sapiens structure protein NSP5a3a
protein.
Length = 709
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 400 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 440
>AB041533-1|BAB16440.1| 759|Homo sapiens sperm antigen protein.
Length = 759
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
R ++ NI+Q L +++ EE+ AL+ + R KEE +KL+E
Sbjct: 450 REKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNE 490
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 180 SGEKLSGLCLRVACVKGAN*SINVTISS*FCKFFMTSLE*SACCCILSAAKAANSISLVC 359
S + G C+ V C + + SS C+ +S + CC S + ++S+SL+C
Sbjct: 310 SSQSQQGCCVPVCCKPVSCVPVCSGASSSCCQ--QSSCQ--PACCTTSCCRPSSSVSLLC 365
Query: 360 TRICRSA 380
+CR A
Sbjct: 366 RPVCRPA 372
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 180 SGEKLSGLCLRVACVKGAN*SINVTISS*FCKFFMTSLE*SACCCILSAAKAANSISLVC 359
S + G C+ V C + + SS C+ +S + CC S + ++S+SL+C
Sbjct: 310 SSQSQQGCCVPVCCKPVSCVPVCSGASSSCCQ--QSSCQ--PACCTTSCCRPSSSVSLLC 365
Query: 360 TRICRSA 380
+CR A
Sbjct: 366 RPVCRPA 372
>BC008496-1|AAH08496.1| 229|Homo sapiens coiled-coil domain
containing 34 protein.
Length = 229
Score = 31.5 bits (68), Expect = 3.5
Identities = 12/35 (34%), Positives = 26/35 (74%)
Frame = -2
Query: 559 EQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKM 455
++ ++ + ++KAL++LN+Q E+ K++ E EK K+
Sbjct: 152 KEKEERDRLQLKALEELNQQLEKRKEMEEREKRKI 186
>AY598334-1|AAT06745.1| 229|Homo sapiens L15 protein.
Length = 229
Score = 31.5 bits (68), Expect = 3.5
Identities = 12/35 (34%), Positives = 26/35 (74%)
Frame = -2
Query: 559 EQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKM 455
++ ++ + ++KAL++LN+Q E+ K++ E EK K+
Sbjct: 152 KEKEERDRLQLKALEELNQQLEKRKEMEEREKRKI 186
>AF155108-1|AAD42874.1| 241|Homo sapiens NY-REN-41 antigen protein.
Length = 241
Score = 31.5 bits (68), Expect = 3.5
Identities = 12/35 (34%), Positives = 26/35 (74%)
Frame = -2
Query: 559 EQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKM 455
++ ++ + ++KAL++LN+Q E+ K++ E EK K+
Sbjct: 191 KEKEERDRLQLKALEELNQQLEKRKEMEEREKRKI 225
>AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated protein
protein.
Length = 401
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 180 SGEKLSGLCLRVACVKGAN*SINVTISS*FCKFFMTSLE*SACCCILSAAKAANSISLVC 359
S + G C+ V C + + SS C+ +S + CC S + ++S+SL+C
Sbjct: 310 SSQSQQGCCVPVCCKPVSCVPVCSGASSSCCQ--QSSCQ--PACCTTSCCRPSSSVSLLC 365
Query: 360 TRICRSA 380
+CR A
Sbjct: 366 RPVCRPA 372
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Frame = -2
Query: 577 IKQNLQEQVKQ----TEEQRIKALQDLNRQKEE----MKKLSEGEKAKM 455
+K + EQ+K +EE+RI Q+L+R K+E MKK SE + AK+
Sbjct: 433 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKL 481
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Frame = -2
Query: 577 IKQNLQEQVKQ----TEEQRIKALQDLNRQKEE----MKKLSEGEKAKM 455
+K + EQ+K +EE+RI Q+L+R K+E MKK SE + AK+
Sbjct: 433 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKL 481
>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
Length = 2083
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Frame = -2
Query: 577 IKQNLQEQVKQ----TEEQRIKALQDLNRQKEE----MKKLSEGEKAKM 455
+K + EQ+K +EE+RI Q+L+R K+E MKK SE + AK+
Sbjct: 288 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKL 336
>AF273047-1|AAG34907.1| 623|Homo sapiens CTCL tumor antigen se20-7
protein.
Length = 623
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Frame = -2
Query: 577 IKQNLQEQVKQ----TEEQRIKALQDLNRQKEE----MKKLSEGEKAKM 455
+K + EQ+K +EE+RI Q+L+R K+E MKK SE + AK+
Sbjct: 96 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKL 144
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Frame = -2
Query: 577 IKQNLQEQVKQ----TEEQRIKALQDLNRQKEE----MKKLSEGEKAKM 455
+K + EQ+K +EE+RI Q+L+R K+E MKK SE + AK+
Sbjct: 464 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKL 512
>AB076347-1|BAD01534.1| 282|Homo sapiens keratin associated protein
protein.
Length = 282
Score = 31.1 bits (67), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSARDFSAAVCAS 410
CC S + ++S+SL+C +CR A + C +
Sbjct: 220 CCTTSCCRPSSSVSLLCRPVCRPACCMPVSSCCA 253
>BC131613-1|AAI31614.1| 292|Homo sapiens keratin associated protein
10-9 protein.
Length = 292
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSARDFSAAVCAS 410
CC S + ++S+SL+C +CR A + C +
Sbjct: 219 CCTTSCCRPSSSVSLLCRPVCRPACCVPVSSCCA 252
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSARDFSAAVCAS 410
CC S + ++S+SL+C +CRS + C +
Sbjct: 225 CCTTSCCRPSSSVSLLCHPVCRSTCCVPVSSCCA 258
>BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C ICR A
Sbjct: 209 CCTTSCCRPSSSVSLLCRPICRPA 232
>BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C ICR A
Sbjct: 209 CCTTSCCRPSSSVSLLCRPICRPA 232
>BC052963-1|AAH52963.1| 1394|Homo sapiens SRCAP protein protein.
Length = 1394
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = -2
Query: 580 NIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
++++ +E++KQ EEQ A +DL++ KEE+ +L + E+
Sbjct: 487 SLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEEE 525
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = -2
Query: 580 NIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
++++ +E++KQ EEQ A +DL++ KEE+ +L + E+
Sbjct: 2323 SLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEEE 2361
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = -2
Query: 580 NIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
++++ +E++KQ EEQ A +DL++ KEE+ +L + E+
Sbjct: 2064 SLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEEE 2102
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSARDFSAAVCAS 410
CC S + ++S+SL+C +CRS + C +
Sbjct: 225 CCTTSCCRPSSSVSLLCHPVCRSTCCVPVSSCCA 258
>AB076356-1|BAD01543.1| 292|Homo sapiens keratin associated protein
protein.
Length = 292
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSARDFSAAVCAS 410
CC S + ++S+SL+C +CR A + C +
Sbjct: 219 CCTTSCCRPSSSVSLLCRPVCRPACCVPVSSCCA 252
>AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated protein
protein.
Length = 271
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C ICR A
Sbjct: 209 CCTTSCCRPSSSVSLLCRPICRPA 232
>AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRS 377
CC S + ++S+SL+C +CRS
Sbjct: 146 CCTTSCCRPSSSVSLLCRPVCRS 168
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = -2
Query: 580 NIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
++++ +E++KQ EEQ A +DL++ KEE+ +L + E+
Sbjct: 2146 SLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEEE 2184
>BC127016-1|AAI27017.1| 259|Homo sapiens KRTAP10-8 protein protein.
Length = 259
Score = 30.3 bits (65), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C +CR A
Sbjct: 197 CCTTSCCRPSSSVSLLCRPVCRPA 220
>BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated protein
10-7 protein.
Length = 370
Score = 30.3 bits (65), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C +CR A
Sbjct: 297 CCTTSCCRPSSSVSLLCRPVCRPA 320
>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
initiation factor 5B protein.
Length = 1220
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 389
>BC022260-1|AAH22260.1| 400|Homo sapiens Unknown (protein for
IMAGE:4804924) protein.
Length = 400
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 389
>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
protein.
Length = 1132
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 267 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 301
>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
Length = 1220
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 389
>AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation
factor IF2 protein.
Length = 1220
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 389
>AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 389
>AB076355-1|BAD01542.1| 259|Homo sapiens keratin associated protein
protein.
Length = 259
Score = 30.3 bits (65), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C +CR A
Sbjct: 197 CCTTSCCRPSSSVSLLCRPVCRPA 220
>AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated protein
protein.
Length = 370
Score = 30.3 bits (65), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRSA 380
CC S + ++S+SL+C +CR A
Sbjct: 297 CCTTSCCRPSSSVSLLCRPVCRPA 320
>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
Length = 1222
Score = 30.3 bits (65), Expect = 8.1
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = -2
Query: 562 QEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+E+ K+ EE+RIK L++L +++E ++L + ++ +
Sbjct: 357 EERQKREEEERIKRLEELEAKRKEEERLEQEKRER 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,970,582
Number of Sequences: 237096
Number of extensions: 1088448
Number of successful extensions: 3359
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3347
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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