Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_D14
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 32 0.53
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 32 0.53
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 31 0.70
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.70
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 31 0.70
AY305834-1|AAR11979.1| 327|Caenorhabditis elegans nuclear recep... 31 1.2
AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear recep... 31 1.2
AC006810-4|AAT68890.1| 425|Caenorhabditis elegans Nuclear hormo... 31 1.2
AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormo... 31 1.2
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 30 2.1
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 30 2.1
Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical pr... 29 2.8
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 29 2.8
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 29 2.8
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 29 2.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 29 3.7
Z97628-1|CAB10725.1| 250|Caenorhabditis elegans Hypothetical pr... 28 6.5
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 28 6.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 8.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.6
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -2
Query: 574 KQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
KQ +E+ K+ EE+RI+ D +QKE+ K+ E +K
Sbjct: 556 KQKDEERRKKDEEERIQKENDEKKQKEDEAKMEEEKK 592
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -2
Query: 574 KQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEK 464
KQ +E+ K+ EE+RI+ D +QKE+ K+ E +K
Sbjct: 570 KQKDEERRKKDEEERIQKENDEKKQKEDEAKMEEEKK 606
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 571 QNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+ LQE+ K+ +E+ + L+ +++EE K+ E EKAK
Sbjct: 198 RRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAK 235
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 571 QNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+ LQE+ K+ +E+ + L+ +++EE K+ E EKAK
Sbjct: 234 RRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAK 271
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 571 QNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+ LQE+ K+ +E+ + L+ +++EE K+ E EKAK
Sbjct: 234 RRLQEKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAK 271
>AY305834-1|AAR11979.1| 327|Caenorhabditis elegans nuclear receptor
NHR-13 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 140 ESTTGPETRPTEKIRRETQWAVS-----EGCLCKRCKLVYKCYHFQLILQ 274
EST GP + P+E + E Q V+ E +C R +L+Y ++L+
Sbjct: 44 ESTPGPSSEPSENVSAENQETVTKFLKLEASMCDRRRLLYAETPISIVLE 93
>AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear receptor
NHR-13 protein.
Length = 415
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 140 ESTTGPETRPTEKIRRETQWAVS-----EGCLCKRCKLVYKCYHFQLILQ 274
EST GP + P+E + E Q V+ E +C R +L+Y ++L+
Sbjct: 132 ESTPGPSSEPSENVSAENQETVTKFLKLEASMCDRRRLLYAETPISIVLE 181
>AC006810-4|AAT68890.1| 425|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 13, isoform b protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 140 ESTTGPETRPTEKIRRETQWAVS-----EGCLCKRCKLVYKCYHFQLILQ 274
EST GP + P+E + E Q V+ E +C R +L+Y ++L+
Sbjct: 131 ESTPGPSSEPSENVSAENQETVTKFLKLEASMCDRRRLLYAETPISIVLE 180
>AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 13, isoform a protein.
Length = 414
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 140 ESTTGPETRPTEKIRRETQWAVS-----EGCLCKRCKLVYKCYHFQLILQ 274
EST GP + P+E + E Q V+ E +C R +L+Y ++L+
Sbjct: 131 ESTPGPSSEPSENVSAENQETVTKFLKLEASMCDRRRLLYAETPISIVLE 180
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = -2
Query: 577 IKQNLQEQVKQTEEQRIKALQDLNRQKEE--MKKLSEGEKAK 458
I++ Q+++ + E+Q++ +Q+L +QK+E MK + E E K
Sbjct: 378 IQEEKQKKLDEEEQQKVLKIQELEKQKDEQIMKSMLELEDMK 419
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRS 377
CC++ K++NS +++C CRS
Sbjct: 306 CCVIGCEKSSNSKTIMCKTCCRS 328
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 309 CCILSAAKAANSISLVCTRICRS 377
CC++ K++NS +++C CRS
Sbjct: 306 CCVIGCEKSSNSKTIMCKTCCRS 328
>Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical
protein F07A11.1 protein.
Length = 537
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 577 IKQNLQEQVKQTEE--QRIKALQDLNRQKEEMKKLSEGEKAK 458
+++ +E+ ++ EE +R K +DL R+KEE K E E+ K
Sbjct: 202 MRRQAEEERRKYEETMKRAKMYEDLTREKEETFKREEAERNK 243
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = -2
Query: 559 EQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
E+ K+ EE+R+K Q L+ + +E++K+S+
Sbjct: 426 EEKKKYEEERVKLYQQLDEKDDEIQKVSQ 454
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = -2
Query: 559 EQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
E+ K+ EE+R+K Q L+ + +E++K+S+
Sbjct: 426 EEKKKYEEERVKLYQQLDEKDDEIQKVSQ 454
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = -2
Query: 559 EQVKQTEEQRIKALQDLNRQKEEMKKLSE 473
E+ K+ EE+R+K Q L+ + +E++K+S+
Sbjct: 426 EEKKKYEEERVKLYQQLDEKDDEIQKVSQ 454
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = -2
Query: 574 KQNLQEQVKQTEEQRIKALQDLNRQK--EEMKKLSEGEK 464
K ++++ + EEQ+IKA ++ R++ E+ KK+ EG++
Sbjct: 975 KVKIEKEKVKAEEQKIKAAEEERRKERAEDAKKVKEGQE 1013
>Z97628-1|CAB10725.1| 250|Caenorhabditis elegans Hypothetical
protein VF39H2L.1 protein.
Length = 250
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 586 IGNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAK 458
+G I + V EEQ +A +D+ R E +KK + + AK
Sbjct: 156 LGRIVHEQHDVVDSIEEQVERATEDVKRGNENLKKAVKSKAAK 198
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -2
Query: 595 RTRIGNIKQNLQEQVKQTEEQRIK---ALQDLNRQKEEMKKLSEGEKAKM 455
+T IKQ +E+ Q +EQ K A + L +Q+EE+K+ + K K+
Sbjct: 139 KTFTDKIKQKQEEKEAQRQEQIEKWKQASEKLQQQREELKQQIDAAKQKL 188
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 577 IKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKM 455
+KQ ++K+ ++ R+K D QKE+ KL + AK+
Sbjct: 7297 LKQEADAKLKKEKDDRLKKDADAKLQKEKDDKLKQEADAKL 7337
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 577 IKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKM 455
+KQ ++K+ ++ R+K D QKE+ KL + AK+
Sbjct: 7317 LKQEADAKLKKEKDDRLKKDADAKLQKEKDDKLKQEADAKL 7357
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 577 IKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKM 455
+KQ ++K+ ++ R+K D QKE+ KL + AK+
Sbjct: 7317 LKQEADAKLKKEKDDRLKKDADAKLQKEKDDKLKQEADAKL 7357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,101,517
Number of Sequences: 27780
Number of extensions: 177770
Number of successful extensions: 692
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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