Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_D13
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical pr...    50   3e-06
Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical pr...    50   3e-06
X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin pr...    50   3e-06
U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory ...    50   3e-06
Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical p...    49   3e-06
Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z78200-11|CAB01587.2|  426|Caenorhabditis elegans Hypothetical p...    34   0.10 
Z78198-13|CAB01575.2|  426|Caenorhabditis elegans Hypothetical p...    34   0.10 
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    29   5.1  

>Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical
           protein C54C6.2 protein.
          Length = 444

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 32/58 (55%)
 Frame = -1

Query: 766 GXXPAIQEXXQXIXGXVYRYVQXQXFXALVQPARGMDEMEFXEAESNMNXLVSEYQQY 593
           G   AIQE  + I        + + F        GMDEMEF EAESNMN LVSEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQY 425


>Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical
           protein B0272.1 protein.
          Length = 444

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 32/58 (55%)
 Frame = -1

Query: 766 GXXPAIQEXXQXIXGXVYRYVQXQXFXALVQPARGMDEMEFXEAESNMNXLVSEYQQY 593
           G   AIQE  + I        + + F        GMDEMEF EAESNMN LVSEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQY 425


>X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin
           protein.
          Length = 441

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 32/58 (55%)
 Frame = -1

Query: 766 GXXPAIQEXXQXIXGXVYRYVQXQXFXALVQPARGMDEMEFXEAESNMNXLVSEYQQY 593
           G   AIQE  + I        + + F        GMDEMEF EAESNMN LVSEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQY 425


>U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory
           abnormality protein7 protein.
          Length = 441

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 32/58 (55%)
 Frame = -1

Query: 766 GXXPAIQEXXQXIXGXVYRYVQXQXFXALVQPARGMDEMEFXEAESNMNXLVSEYQQY 593
           G   AIQE  + I        + + F        GMDEMEF EAESNMN LVSEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLVSEYQQY 425


>Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical
           protein K01G5.7 protein.
          Length = 449

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 32/58 (55%)
 Frame = -1

Query: 766 GXXPAIQEXXQXIXGXVYRYVQXQXFXALVQPARGMDEMEFXEAESNMNXLVSEYQQY 593
           G   AIQE  + I        + + F        GMDEMEF EAESNMN L+SEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLISEYQQY 425


>Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical
           protein C36E8.5 protein.
          Length = 450

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 32/58 (55%)
 Frame = -1

Query: 766 GXXPAIQEXXQXIXGXVYRYVQXQXFXALVQPARGMDEMEFXEAESNMNXLVSEYQQY 593
           G   AIQE  + I        + + F        GMDEMEF EAESNMN L+SEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYT-GEGMDEMEFTEAESNMNDLISEYQQY 425


>Z78200-11|CAB01587.2|  426|Caenorhabditis elegans Hypothetical
           protein T04H1.9 protein.
          Length = 426

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -1

Query: 661 MDEMEFXEAESNMNXLVSEYQQY 593
           M+E EF +AE+ +N L+SE+QQY
Sbjct: 398 MEESEFTDAENKVNDLISEFQQY 420


>Z78198-13|CAB01575.2|  426|Caenorhabditis elegans Hypothetical
           protein T04H1.9 protein.
          Length = 426

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -1

Query: 661 MDEMEFXEAESNMNXLVSEYQQY 593
           M+E EF +AE+ +N L+SE+QQY
Sbjct: 398 MEESEFTDAENKVNDLISEFQQY 420


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
            H02I12.1 protein.
          Length = 1319

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 169  YLRCNFSSSFCNQCDELLAFSNE 101
            YLRC++ +S   QC E   FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,817,188
Number of Sequences: 27780
Number of extensions: 241296
Number of successful extensions: 536
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)