Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_D11
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   282   2e-78
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   282   2e-78
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  282 bits (692), Expect = 2e-78
 Identities = 127/155 (81%), Positives = 142/155 (91%)
 Frame = -3

Query: 697 GGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGPYRGFGV 518
           GGAAGATSLCFVYPLDFARTRLAADVGK  G+REF+GLGNC++KIFK+DG+ G YRGFGV
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGV 181

Query: 517 SVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWATAQTVTTAAGIISYPFDTVRRRMM 338
           SVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW  AQ VTT AGI+SYPFDTVRRRMM
Sbjct: 182 SVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMM 241

Query: 337 MQSGRAKSDILYKNTIHCWATIAKTEGTSAFXQGS 233
           MQSGRAKS+ILYK+T+HCWATI KTEG +AF +G+
Sbjct: 242 MQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGA 276



 Score = 51.6 bits (118), Expect = 8e-09
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 240 KGAFSNVLRGTGGAFVLVLYDEIKKVL 160
           KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 8/162 (4%)
 Frame = -3

Query: 697 GGAAGATSLCFVYPLDFARTRLAAD-VGKGDGQRE-FSGLGNCISKIFKSDGLIGPYRGF 524
           GG A A S   V P++  +  L    + K   + + + G+ +C  +I K  G +  +RG 
Sbjct: 17  GGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGN 76

Query: 523 GVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIVISWATAQTVTTAAGIIS----YPF 362
             +V      +A  F F D  + +      KNT  +  +        AAG  S    YP 
Sbjct: 77  LANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPL 136

Query: 361 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFXQG 236
           D  R R+    G+A  +  +    +C   I K +G +   +G
Sbjct: 137 DFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178



 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/56 (21%), Positives = 23/56 (41%)
 Frame = -3

Query: 715 LVIWPXGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 548
           L+ W         +    YP D  R R+    G+   +  +    +C + I+K++G
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEG 268



 Score = 25.4 bits (53), Expect = 0.59
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -3

Query: 367 PFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQGSL 230
           P + V+  + +Q  S +   +  YK  I C+  I K +G  ++ +G+L
Sbjct: 30  PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  282 bits (692), Expect = 2e-78
 Identities = 127/155 (81%), Positives = 142/155 (91%)
 Frame = -3

Query: 697 GGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGPYRGFGV 518
           GGAAGATSLCFVYPLDFARTRLAADVGK  G+REF+GLGNC++KIFK+DG+ G YRGFGV
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGV 181

Query: 517 SVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWATAQTVTTAAGIISYPFDTVRRRMM 338
           SVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW  AQ VTT AGI+SYPFDTVRRRMM
Sbjct: 182 SVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMM 241

Query: 337 MQSGRAKSDILYKNTIHCWATIAKTEGTSAFXQGS 233
           MQSGRAKS+ILYK+T+HCWATI KTEG +AF +G+
Sbjct: 242 MQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGA 276



 Score = 51.6 bits (118), Expect = 8e-09
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 240 KGAFSNVLRGTGGAFVLVLYDEIKKVL 160
           KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 8/162 (4%)
 Frame = -3

Query: 697 GGAAGATSLCFVYPLDFARTRLAAD-VGKGDGQRE-FSGLGNCISKIFKSDGLIGPYRGF 524
           GG A A S   V P++  +  L    + K   + + + G+ +C  +I K  G +  +RG 
Sbjct: 17  GGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGN 76

Query: 523 GVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIVISWATAQTVTTAAGIIS----YPF 362
             +V      +A  F F D  + +      KNT  +  +        AAG  S    YP 
Sbjct: 77  LANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPL 136

Query: 361 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFXQG 236
           D  R R+    G+A  +  +    +C   I K +G +   +G
Sbjct: 137 DFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178



 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/56 (21%), Positives = 23/56 (41%)
 Frame = -3

Query: 715 LVIWPXGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 548
           L+ W         +    YP D  R R+    G+   +  +    +C + I+K++G
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEG 268



 Score = 25.4 bits (53), Expect = 0.59
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -3

Query: 367 PFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQGSL 230
           P + V+  + +Q  S +   +  YK  I C+  I K +G  ++ +G+L
Sbjct: 30  PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 170 LISSYKTSTKAPPVPLRTLEKAPL 241
           L++++KT T+ P    + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,493
Number of Sequences: 438
Number of extensions: 3839
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)