Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_D09
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 83 3e-16
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 67 1e-11
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 66 4e-11
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 61 9e-10
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 50 2e-06
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 49 5e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 46 4e-05
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 40 0.003
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 34 0.15
07_03_0843 - 21962223-21963815,21963957-21964607 30 1.9
07_01_1111 + 10279778-10280065,10280265-10280340,10280734-102819... 29 3.3
05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 29 4.3
02_02_0440 - 10273032-10273259,10273423-10273461,10273875-102741... 29 4.3
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 5.7
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 29 5.7
03_05_0078 + 20555296-20555560,20555643-20555887,20555947-205561... 28 7.5
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 28 9.9
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 28 9.9
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 28 9.9
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 28 9.9
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 28 9.9
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = -1
Query: 625 DESIFNSILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKSKVG 446
DE F I RS+ + + Y + + +E +K E G+ E +L I +C ++
Sbjct: 173 DEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCAENPAK 232
Query: 445 XFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKS 308
FA+ L SMKG+GT+D TLIR+VV+R+EID+ IK + +KY KS
Sbjct: 233 YFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKS 278
Score = 32.3 bits (70), Expect = 0.46
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Frame = -1
Query: 604 ILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKSK--------V 449
I+ +R+ Q + + Y A G +E I + G +K +LA + + V
Sbjct: 96 IICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYVGIPRYEGPEVDPTIV 155
Query: 448 GXFAERLYYS-MKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKS 308
A+ LY + K +GT++KT IRI RS + + A+ Y +S
Sbjct: 156 THDAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRS 203
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = -1
Query: 523 SIKKEFXGSIEKGMLAIAKCVKSKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGD 344
++K E G+ G+L I +C +S FA+ L+ +MKG+GTND TLIR+V +R+E+D+
Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 343 IKQAFLEKYGKSPGD 299
IK + Y +S D
Sbjct: 310 IKAEYHRSYKRSLAD 324
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 65.7 bits (153), Expect = 4e-11
Identities = 31/112 (27%), Positives = 55/112 (49%)
Frame = -1
Query: 634 GEPDESIFNSILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKS 455
G DE++ + RS Q R F Y+ + G D ++KK G E+ + + KC+ +
Sbjct: 184 GSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCIYN 243
Query: 454 KVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSPGD 299
F++ L+ S++ TN + + R ++ ++D+ IK F YGK D
Sbjct: 244 PSMYFSKLLHRSLQCSATNKRLVTRAILGSDDVDMDKIKSVFKSSYGKDLED 295
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/96 (33%), Positives = 50/96 (52%)
Frame = -1
Query: 604 ILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKSKVGXFAERLY 425
I+ TRS Q R F Y G DI + I G + + C+ S FAE +
Sbjct: 181 IVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSPEKHFAEVIR 240
Query: 424 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKY 317
+S+ G+GT + L R++VSR+EID+ I++ + +Y
Sbjct: 241 HSILGLGTYEDMLTRVIVSRAEIDMRHIREEYKVRY 276
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = -1
Query: 625 DESIFNSILITRSYQQXRQIFAEYEALTG----KDIEDSIKKEFXGSIEKGMLAIAKCVK 458
D+ I IL TRS Q F Y G KD++ K EF G++ AI +C
Sbjct: 113 DDEIIR-ILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLR----AIIRCFT 167
Query: 457 SKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEK 320
F + + ++ G+GT++ +L RI+ +R+E+DL IK+A+ ++
Sbjct: 168 CPDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKR 213
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1
Query: 436 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
E+L + KG GTN+K +I I+ R I++A+ E YG+
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGE 59
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/96 (29%), Positives = 49/96 (51%)
Frame = -1
Query: 604 ILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKSKVGXFAERLY 425
I+ TRS Q Y GK I++ + + + A C+ S FAE +
Sbjct: 246 IVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHFAEVIR 305
Query: 424 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKY 317
S+ G+GT+++ L R +VSR+E+D+ +K+ + +Y
Sbjct: 306 TSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRY 341
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Frame = -1
Query: 625 DESIFNSILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKSKVG 446
DE+ IL R+ Q +I YE L + + D + E G ++ ++
Sbjct: 76 DENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALMLWTMDPAARDA 135
Query: 445 XFA-ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKS 308
A E L KG + L+ + + S L +++A+ Y S
Sbjct: 136 KLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAYASS 182
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/102 (28%), Positives = 50/102 (49%)
Frame = -1
Query: 625 DESIFNSILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIAKCVKSKVG 446
D+ I IL TRS Q F Y G I +K + + AI +C
Sbjct: 188 DDEIIR-ILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCFCCPDR 246
Query: 445 XFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEK 320
F + + ++ G+GT++ +L RI+ +R+E+DL I +A+ ++
Sbjct: 247 YFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKR 288
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 309 PLETWIADDTKGDFKRVLLTLV 244
PLE +A DT GD++R+LL L+
Sbjct: 292 PLERAVAGDTSGDYERMLLALL 313
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 436 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
++L + +G GTN+ +I I+ R I++A+ + YG+
Sbjct: 18 DQLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGE 59
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -1
Query: 634 GEPDESIFNSILITRSYQQXRQIFAEYEALTGKDIEDSIKKEFXGSIEKGMLAIA-KCVK 458
G+ D I+ TRS Q F+ + G I +++ + L A +C+
Sbjct: 155 GDTDHGELIRIVGTRSRAQLNATFSWFRDERGTSITKALQHGADPTGYSHALRTALRCIS 214
Query: 457 SKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEK 320
F + L +M GTN+ +L R++V +E DL IK AF ++
Sbjct: 215 DANKYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQKR 260
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = -3
Query: 554 RSFDRKRH*GLDQERILW*H*EGHARYCQMRKEQGRFXR*APVLLDEGHRHQRQDAHPHR 375
R DR R G D ER GH R+ + +++ R A D GH H+R DA
Sbjct: 367 RDRDRDRDRGRDYERD---RDRGHDRHRERGRDRERDYERASHERDRGHMHER-DAEFAN 422
Query: 374 GEPLRDRPRGH 342
GEP D+ G+
Sbjct: 423 GEPKHDQEYGY 433
>07_03_0843 - 21962223-21963815,21963957-21964607
Length = 747
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 371 EPLRDRPRGHQAGIPREVRQVPWRPGSLTIRKETSN 264
EP+ + +GH AGI + V P R +L+++ T N
Sbjct: 202 EPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGN 237
>07_01_1111 +
10279778-10280065,10280265-10280340,10280734-10281944,
10283779-10284138
Length = 644
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -2
Query: 636 MGNPTNQSSTPSLSLAPISX*DRSSPSTKL*PEKTLRT 523
+GNP N S PSL+L P S SS ST P K +T
Sbjct: 11 LGNPVNHSRLPSLALCPGS----SSSSTSQVPAKERQT 44
>05_02_0047 +
6006808-6007129,6009229-6009890,6009980-6010129,
6010765-6010857,6011370-6011675
Length = 510
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 434 APVLLDEGHRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 309
AP+L H H H H E + G + +P +VR V
Sbjct: 283 APLLQPHSHSHSHPHGHGHGHELAQPEGSGGEGEVPAQVRSV 324
>02_02_0440 -
10273032-10273259,10273423-10273461,10273875-10274123,
10274203-10274329,10275009-10275251,10275359-10275457,
10275566-10275681,10275813-10276039,10276164-10276276,
10276402-10276522,10276641-10276855,10277042-10277225,
10277739-10278048,10278155-10278249,10278473-10278485
Length = 792
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 318 YFSRNACLMSPRSISERLTTMRMSVLS 398
YF AC+ P SERL R+SVL+
Sbjct: 519 YFLAAACIFEPNRASERLAWARVSVLA 545
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 410 HRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 309
H H R H HR + +R G AG ++ R+V
Sbjct: 138 HSHHRHGGHHHRSDSVRGGGTGATAGSDKDGREV 171
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 463 VKSKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 412 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSNEMEQLGYLKQAKGKKASK 461
>03_05_0078 +
20555296-20555560,20555643-20555887,20555947-20556180,
20556451-20556537,20556624-20556959,20557057-20557194,
20557231-20557311,20557392-20557480,20557750-20557813,
20557896-20557985,20558064-20558186
Length = 583
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 312 LPYFSRNACLMSPRSISERLTTMRMSVLSLVP 407
+PY NA +S S+ +R T +M+V S+VP
Sbjct: 505 IPYERTNAKQLSEESLGKRSRTSQMNVKSMVP 536
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 463 VKSKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 517 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSDEMEQLGYLKQAKGKKASK 566
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 463 VKSKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 478 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSDEMEQLGYLKQAKGKKASK 527
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 463 VKSKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 412 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSDEMEQLGYLKQAKGKKASK 461
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 463 VKSKVGXFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 311
V+S V FA Y ++K + N K L+R+ S LG +KQA +K K
Sbjct: 559 VRSGVTRFATA-YLNLKSLLDNKKELVRLFKSDEMEQLGYLKQAKGKKASK 608
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Frame = -1
Query: 463 VKSKVGXFAERLYYSMKGIGTNDK---------TLIRIVVSRSEIDLGDIKQAFL-EKYG 314
V+ K+ F + + +S KGI N T + VV++ E+DL DIK L EK
Sbjct: 158 VREKIRSFEKEIKFSTKGINENKAQKEDVEKKCTEVLKVVAQIELDLRDIKDRILNEKLA 217
Query: 313 KSPGDLD 293
K D
Sbjct: 218 KDEAARD 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,363,538
Number of Sequences: 37544
Number of extensions: 272221
Number of successful extensions: 741
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -