Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_D07
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128...    29   3.1  
06_03_1345 + 29478768-29479922                                         29   4.1  
03_04_0153 + 17745473-17745889,17746120-17746272,17747307-177475...    29   4.1  
02_04_0288 + 21607289-21608251                                         29   4.1  
07_03_0506 - 18861787-18861917,18862017-18862201,18862542-188626...    28   7.2  
04_04_0315 - 24331996-24332853                                         28   9.5  

>04_01_0123 -
           1283197-1283292,1283330-1284439,1284790-1285177,
           1285523-1287609
          Length = 1226

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
 Frame = -2

Query: 519 QHNAAVYSAPYARNPFDHITDNEIDEYRRDVERKRRGNEYDTDLSES--EAISAAQMXXX 346
           QH  AV  A    NP+D + +   D+ +R  ER R   E  T+LS +  EA +AA     
Sbjct: 209 QHIRAV-QAILRENPYDPVLN---DDLKRWTERLR---ESVTNLSNAFEEAATAAHPEQP 261

Query: 345 XXXXXXXXXXPRDE--HRVLRIETKQAPVRSQPEVVLSDVDTTDFLNAERAHVDSTRGDH 172
                      R E   R          +R Q         T D +N  R HV S R D+
Sbjct: 262 PTGDANGEDPERRESPQRATPPPRGTGDLRDQINGRQEARRTRDNVNRSRRHVSSRRHDN 321

Query: 171 TVNGDHSDAHQSTFSH 124
              GD S+  +   +H
Sbjct: 322 GNRGDRSNEDRDQDNH 337


>06_03_1345 + 29478768-29479922
          Length = 384

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -2

Query: 540 GIIQRGYQHNAAVYSAPYARNPFDHITD--NEIDEYRRDVERKRR 412
           G+     +  AA  +   AR PFDH+     E+ E   D ER+RR
Sbjct: 38  GVAAASIRLRAARATGGDARQPFDHVPRGVEEVGEMEEDEERRRR 82


>03_04_0153 +
           17745473-17745889,17746120-17746272,17747307-17747512,
           17747752-17747959
          Length = 327

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +3

Query: 72  WA-NPRWKPPSTESPLYCCERMYSDGRPNGH 161
           WA  PRW+PP   +   CC    +  R  GH
Sbjct: 29  WAPRPRWRPPGAGAADSCCLLFRARARRRGH 59


>02_04_0288 + 21607289-21608251
          Length = 320

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 466 MVEGVPGVGRAVHGRVVLVAALDDALRGRSHXH 564
           M  G P +GR    RV++ AA  D LR R+H +
Sbjct: 234 MAPGAPPLGRMACDRVMVCAAEGDFLRWRAHAY 266


>07_03_0506 -
           18861787-18861917,18862017-18862201,18862542-18862613,
           18863163-18863234,18863596-18863667,18864371-18864518,
           18864864-18865922,18866663-18866762
          Length = 612

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 528 RGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERKRRGNEYDT 394
           R  Q  AA   APYA++      D ++ ++ R  E  R GN+  T
Sbjct: 562 RRAQKLAAAREAPYAKSRTQFTRDMQMAKHHRPHESSRSGNDEST 606


>04_04_0315 - 24331996-24332853
          Length = 285

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 538 HHPARLPAQRGRVQRALRPEPLRPYH 461
           HHP  + +Q G+  R   P PL P H
Sbjct: 26  HHPRLISSQVGQPARPTSPSPLPPRH 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,116,736
Number of Sequences: 37544
Number of extensions: 259131
Number of successful extensions: 843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)