Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_D07
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF166168-1|AAD49857.1|  679|Caenorhabditis elegans adducin-relat...    53   3e-07
AF166167-1|AAD49856.1|  732|Caenorhabditis elegans adducin-relat...    53   3e-07
AF039043-6|AAP82653.1|  718|Caenorhabditis elegans Adducin prote...    53   3e-07
AF039043-5|AAK70639.1|  732|Caenorhabditis elegans Adducin prote...    53   3e-07
AF039043-4|AAL32219.1|  702|Caenorhabditis elegans Adducin prote...    53   3e-07
AF039043-3|AAM54181.1|  682|Caenorhabditis elegans Adducin prote...    53   3e-07
AF039043-2|AAK70638.1|  679|Caenorhabditis elegans Adducin prote...    53   3e-07
AF016441-3|AAB65909.2|  744|Caenorhabditis elegans Hypothetical ...    31   0.91 
Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF077532-1|AAC26268.1|  301|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z83122-2|CAB05599.1|  155|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AF166168-1|AAD49857.1|  679|Caenorhabditis elegans adducin-related
           protein protein.
          Length = 679

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF166167-1|AAD49856.1|  732|Caenorhabditis elegans adducin-related
           protein protein.
          Length = 732

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-6|AAP82653.1|  718|Caenorhabditis elegans Adducin protein
           1, isoform e protein.
          Length = 718

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-5|AAK70639.1|  732|Caenorhabditis elegans Adducin protein
           1, isoform b protein.
          Length = 732

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-4|AAL32219.1|  702|Caenorhabditis elegans Adducin protein
           1, isoform c protein.
          Length = 702

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-3|AAM54181.1|  682|Caenorhabditis elegans Adducin protein
           1, isoform d protein.
          Length = 682

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF039043-2|AAK70638.1|  679|Caenorhabditis elegans Adducin protein
           1, isoform a protein.
          Length = 679

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = -2

Query: 579 TGDHVVXMGAASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERK 418
           T D  + +G ASKGII R +QH+A VY   YA NPF   TD +I +Y   V+ K
Sbjct: 536 TADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKYVDMVKAK 589


>AF016441-3|AAB65909.2|  744|Caenorhabditis elegans Hypothetical
           protein M03F8.3 protein.
          Length = 744

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 459 DNEIDEYRRDVERKRRGNEYDTDLSESEAISAAQ 358
           D E +E  +D E K R  + DTDLSES + S ++
Sbjct: 692 DEEKEEAGKDAEEKVREGDSDTDLSESSSSSDSE 725


>Z81562-6|CAB04554.1|  211|Caenorhabditis elegans Hypothetical
           protein K03D7.9 protein.
          Length = 211

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 246 PLLVGFGPALAWSLFSKLGVRRAAPLLSRTGRWPVTSS 359
           P+  GF P L W L     V+R   L     +W VT S
Sbjct: 20  PISSGFSPGLVWFLSGTAAVQRFVILYISKYKWLVTGS 57


>AF077532-1|AAC26268.1|  301|Caenorhabditis elegans Hypothetical
           protein F40B1.1 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 258 QPEVVLSDVDTTDFLN-AERAHVDSTRGDHTVNGDHSDAHQSTFS 127
           Q EV L D+D TDF N  E  + +    D T++G    AH    S
Sbjct: 190 QKEVTLQDIDPTDFQNLLEVLYGEPAIDDETIDGILHLAHMYDMS 234


>Z83122-2|CAB05599.1|  155|Caenorhabditis elegans Hypothetical
           protein R11A5.3 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = -2

Query: 549 ASKGIIQRGYQHNAAVYSAPYARNPFDHITDNEIDEYRRDVERKRRGNEYD 397
           AS GII+R  + N    SAP    P   I   EI        R RR  E+D
Sbjct: 19  ASDGIIKRPIEGNKKRLSAPIKDKPEHRIAPEEITN-APTTSRLRRAPEFD 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,965,041
Number of Sequences: 27780
Number of extensions: 196309
Number of successful extensions: 691
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)