Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_D05
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 105 5e-23
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 102 4e-22
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 99 2e-21
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 93 3e-19
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 78 9e-15
11_01_0028 - 215821-215880,216114-216284 52 7e-07
01_04_0138 + 16554175-16554822 32 0.47
01_06_0039 + 25857805-25858894,25858997-25859345,25860019-258601... 31 1.1
03_02_0778 - 11123820-11124242,11125196-11125201 30 1.9
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 30 2.5
09_04_0210 + 15644151-15644609 30 2.5
10_07_0104 - 12907816-12908301 29 3.3
05_07_0198 - 28359092-28359457,28359574-28359729,28359844-283600... 29 3.3
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 29 3.3
12_02_0913 + 24246217-24247557 29 4.4
01_06_0154 - 27049218-27049517,27049679-27050107 29 4.4
05_06_0170 - 26124178-26124670,26124699-26124703 29 5.8
05_04_0125 - 18241542-18242129 29 5.8
10_06_0145 + 11215895-11216860 28 7.6
10_06_0030 - 9834515-9834608,9834784-9835277 28 7.6
06_01_0754 - 5644310-5646292 28 7.6
01_06_1487 - 37715421-37715942 28 7.6
01_06_0963 + 33441731-33442096,33442175-33442270 28 7.6
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 7.6
01_01_1005 + 7968862-7969755 28 7.6
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 105 bits (251), Expect = 5e-23
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -1
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ VDCS + +P + FTI GN F L+ Y+L+V + T C+SGF A+D+P P GPL
Sbjct: 432 GESSVDCSSLASMPDIAFTIGGNKFVLKPEQYILKVGEGTATQCISGFTAMDIPPPRGPL 491
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+G Y+T FD GN ++GF
Sbjct: 492 WILGDVFMGAYHTVFDYGNLKVGF 515
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -1
Query: 620 LVQPVFSFYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDSVNVNASR 441
+V PVFSF+ NR G DP HY+G+ VP+ R YW+ +D +
Sbjct: 231 VVDPVFSFWFNRHADEGQGGEIVFGGIDPNHYKGNHTYVPVTRKGYWQ--VDLILKLVGI 288
Query: 440 FCAQGCSAIADTG-TSLIAGPSKEVEALNAAVGATAI 333
C+ CS T+ + + +N +GAT +
Sbjct: 289 LCSWVCSNSRFWNFTAYWSHGMAIITQINEKIGATGV 325
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 102 bits (244), Expect = 4e-22
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -1
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ V C I +P + FTIA F L Y++++ Q G TVC+SGFMA D+P P GPL
Sbjct: 409 GESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPL 468
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+G Y+T FD G ++GF
Sbjct: 469 WILGDVFMGAYHTVFDFGKDRIGF 492
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = -1
Query: 626 QXLVQPVFSFYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDS--VNV 453
+ L VFSF+LNRDP A++ G DP HY+GD VP+ R YW+F+M ++
Sbjct: 208 ELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDG 267
Query: 452 NASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
+++ FCA+GC+AI D+GTSL+AGP+ V +N A+GA I
Sbjct: 268 HSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGI 307
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 99 bits (238), Expect = 2e-21
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -1
Query: 326 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 147
G+ VDC + +P ++FTI G F L+ +Y+L+V + C+SGF A+D+P P GPL
Sbjct: 422 GESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPL 481
Query: 146 WILGDVFIGKYYTEFDAGNRQLGF 75
WILGDVF+G Y+T FD G ++GF
Sbjct: 482 WILGDVFMGAYHTVFDYGKMRVGF 505
Score = 87.8 bits (208), Expect = 9e-18
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Frame = -1
Query: 626 QXLV-QPVFSFYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDSVNVN 450
Q LV +PVFSF+ NR G DP+HY+G+ VP+ + YW+F M V +
Sbjct: 215 QGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMGDVLIG 274
Query: 449 ASR--FCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
FCA GCSAIAD+GTSL+AGP+ + +N +GAT +
Sbjct: 275 GKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGV 315
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 732 PXLAXVXAKXDGILGMXFSTIAVDHVTPVFDNMVXSG 622
P L + AK DGILG+ F I+V PV+ MV G
Sbjct: 180 PGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQG 216
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 92.7 bits (220), Expect = 3e-19
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = -1
Query: 626 QXLVQPVFSFYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDSVNVN- 450
Q + + VFSF+LNRDP A T G DP HY+G VP+ R YW+F M + ++
Sbjct: 207 QLIEKDVFSFWLNRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEMGDLLIDD 266
Query: 449 -ASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 333
++ FC+ GC+AIAD+GTSL+ GP+ V +N A+GA I
Sbjct: 267 YSTGFCSGGCAAIADSGTSLLGGPTTIVAQINHAIGAEGI 306
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 16/71 (22%)
Frame = -1
Query: 239 NDYVLRVAQFGHTVCLSGFMALDVPKPMGPLW----------------ILGDVFIGKYYT 108
+ YV+++ Q G TVC+SGFMA DVP P GPLW ILGDVF+ Y+T
Sbjct: 397 DQYVVKLEQQGQTVCISGFMAFDVPPPRGPLWYTNYTVIKKRELHVVRILGDVFMAAYHT 456
Query: 107 EFDAGNRQLGF 75
FD G ++GF
Sbjct: 457 VFDFGKNRIGF 467
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 732 PXLAXVXAKXDGILGMXFSTIAVDHVTPVFDNM 634
P L + K DGILG+ F I+V P++ M
Sbjct: 171 PSLTFIIGKFDGILGLGFPEISVGGAPPIWQGM 203
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 77.8 bits (183), Expect = 9e-15
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = -1
Query: 608 VFSFYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDS--VNVNASRFC 435
VFSF+LNR+ G+D +HY+GD + R YW+F M + ++ C
Sbjct: 276 VFSFWLNRNANDINGGEIVFGGADESHYKGDHTYTRVTRKAYWQFEMGDFLIGGRSTGIC 335
Query: 434 AQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA 330
GC+ IAD+GTSLIAGP + ++A +GAT +A
Sbjct: 336 VDGCAVIADSGTSLIAGPIAAIAQIHAHIGATGVA 370
Score = 36.3 bits (80), Expect = 0.029
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -3
Query: 732 PXLAXVXAKXDGILGMXFSTIAVDHVTPVFDNMV 631
P L + AK DGILG+ F I+V+ PV+ NM+
Sbjct: 234 PGLTFLAAKFDGILGLGFKEISVEGADPVWYNMI 267
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 374 EVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTL 246
++E N G G YV DC I HLP V F+I G F L
Sbjct: 459 KLEYANQLCGNMPSPVGSYV-DCRHIGHLPNVAFSIGGRAFEL 500
>11_01_0028 - 215821-215880,216114-216284
Length = 76
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -1
Query: 539 DPAHYRGDLVRVPLLRDTYWEFHMDSV--NVNASRFCAQGCSAIADTGTSLIAGPSKEVE 366
DP H++GD V + R YW+F+ + + +++ F A+GC+AI D+ TSL+ P+ V
Sbjct: 2 DPKHFKGDHTYVHVSRKGYWQFNTRDLLTDGHSTGFYAKGCAAIVDSRTSLLTDPTAIVA 61
Query: 365 ALNAAVGATAI 333
+N A A I
Sbjct: 62 QVNHATEAEGI 72
>01_04_0138 + 16554175-16554822
Length = 215
Score = 32.3 bits (70), Expect = 0.47
Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Frame = +3
Query: 63 HGGREPELAVPRVELRVVLADE-HV---PQDPQRAHGLRHVQRHEAGQ-----AHRVPEL 215
HG P+ P LR +A H P PQRA H QR AG A R
Sbjct: 13 HGMDGPDRPKPIGRLRRAVAGHGHSRGWPDRPQRAAARSHQQRRGAGGTGSSGAQRGKRR 72
Query: 216 CHPEHVVVALEREVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQ 395
E V E+ G G G+S + R AA+H RG+ RR G
Sbjct: 73 EETEAVREREVAELTEGHGDGESSRRREAAALHRSTMR---RGSRRRKAAIGRRTGKSGT 129
Query: 396 RRAR 407
RR+R
Sbjct: 130 RRSR 133
>01_06_0039 +
25857805-25858894,25858997-25859345,25860019-25860104,
25860242-25860399,25861489-25861565,25861656-25861722
Length = 608
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 4/111 (3%)
Frame = +3
Query: 123 DEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQVRYE 302
DEH + P+ H+A + H V V G G G + V +
Sbjct: 286 DEHSARPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSGLPVFSGGGGGGALDVGAK 345
Query: 303 AAVHDV----LPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEA 443
+H V LP+ +G G G LGG G G G+ G EA
Sbjct: 346 E-IHMVIPADLPQNNGSGKEHEEYGAVALGGGGGGENFSFGGGKTVDGAEA 395
>03_02_0778 - 11123820-11124242,11125196-11125201
Length = 142
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 152 GPWASARPAP*SRTGTPCARI 214
GPWA+ARP P G PC +
Sbjct: 9 GPWAAARPEPPPPKGRPCGPV 29
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +3
Query: 120 ADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQV-- 293
A E + +RAH RH H+A + H+ H H V+ + + P + V
Sbjct: 684 AQERARRRHKRAHSHRHSHHHDAHKRHKTELAGHRRHHVLHIHDDDDPVAAAAAAEHVIL 743
Query: 294 ----RYEAAVHDVLPEGDGRGAHRRVEG 365
R+EAA+ +G HRR G
Sbjct: 744 RRHGRHEAALGVQHRDGLKLNKHRRHGG 771
>09_04_0210 + 15644151-15644609
Length = 152
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -3
Query: 270 HRRERLHARGQRLRAPGGTIRAHGVPVRLHGAGRAEAHGPA 148
H+ ER A+ R R +RAHG P GAG A PA
Sbjct: 56 HKYERSLAK--RRREIAAALRAHGAPPAADGAGAARYSSPA 94
>10_07_0104 - 12907816-12908301
Length = 161
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 220 WHNSGTRCACPASWRWTCRSPWARCGS 140
W S + C CPA+ RW+ R AR S
Sbjct: 124 WRRSASGCRCPAARRWSGRWSAARARS 150
>05_07_0198 -
28359092-28359457,28359574-28359729,28359844-28360011,
28360082-28360206,28360288-28360405,28360491-28360718,
28360959-28361099,28361433-28361498,28361770-28361862,
28361965-28362225
Length = 573
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 325 PKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQKRLALT 456
PK +A A AA +A T+ PA PVS A P A +R A+T
Sbjct: 12 PKTLAAAAAAAPKAPTA---PAAVSFPVSHAACAPLAARRRAVT 52
>03_06_0222 +
32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 29.5 bits (63), Expect = 3.3
Identities = 27/100 (27%), Positives = 41/100 (41%)
Frame = -1
Query: 398 SLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRV 219
SLI S ++A +A G+ + + P + TF GN+FT+ D VL
Sbjct: 696 SLICQLSTSLDASSAVNSVLTTGAGEDIANTK--PAIS--TFEDDGNNFTVSKLDIVLGG 751
Query: 218 AQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFD 99
++ + K G W L D+ +G Y EFD
Sbjct: 752 SETKSVQLEVTPKVEGILKLHGIRWTLSDLLVGYQYFEFD 791
>12_02_0913 + 24246217-24247557
Length = 446
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 464 SVNVNASRFC--AQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFG 324
+ N + FC A GCS IA G ++AG + EA G +AFG
Sbjct: 153 AANDDIIHFCDLAAGCSVIAGYGAGVVAG-TLGTEAFAFQSGTAELAFG 200
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 160 GFGTSSAMKPDRHTVCPNCATRST*SLPSSVKSFPAMVKVTRGRCGMRLQSTTYCPKAMA 339
G G ++A P R C NC T ST ++ P K CG+R + A A
Sbjct: 112 GAGAAAASAPRR---CANCDTTST----PLWRNGPRGPKSLCNACGIRYKKEERRAAAAA 164
Query: 340 VAPTA 354
VAPTA
Sbjct: 165 VAPTA 169
>05_06_0170 - 26124178-26124670,26124699-26124703
Length = 165
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 303 PHTAPAASHLYHRRERLHARGQRLRAPGGTIRAHGVPVR 187
P AP A+ H ER AR LR P T+ AHG+ R
Sbjct: 128 PPFAPRAAEQEHDEERGEAR---LREPSDTVAAHGLDGR 163
>05_04_0125 - 18241542-18242129
Length = 195
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 330 GDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAAL--GTEAASVD 455
GDGRG RR G +GG G R + G+G A G SVD
Sbjct: 113 GDGRGGRRRRRG---VGGSGGSRGSGHGEGGGAQQPGRRQRSVD 153
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +1
Query: 262 PAMVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQK 441
P +VK G C + STT A V+ T + + TS A + P + P +
Sbjct: 229 PRVVKTEPGCCSVSEASTTTTADAADVSSTGSSPSPTS-SNQAATATPPAPRPPPPLPET 287
Query: 442 RLALTLTESMWN 477
L TE+ W+
Sbjct: 288 IQQLDFTEAPWD 299
>10_06_0030 - 9834515-9834608,9834784-9835277
Length = 195
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -3
Query: 297 TAPAASHLYHRRERLHARGQRLRAPGGTIRAHGVPVRLHGAGRAEAHGPA 148
TA A + R R G+R GG H + R GAGR + H PA
Sbjct: 33 TAGAEDGRVYERAREGTTGKRTHQLGG----HSLSTRERGAGRKKGHWPA 78
>06_01_0754 - 5644310-5646292
Length = 660
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 348 HRRVEGFHLLGGPGDQRRARVGD-GRAALGTEAASVDIDRVHVELPVRVPE 497
HR V+ ++L G GD AR+GD G A L A+ RV L PE
Sbjct: 452 HRDVKANNVLLGAGDTGAARLGDFGLARLYEHGATPATTRVAGTLGYMAPE 502
>01_06_1487 - 37715421-37715942
Length = 173
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 249 REVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGR 422
R ++ G+G G +V H+ PE DGR HR V G G +RR R D R
Sbjct: 34 RRMLGGEG-GARGEVEIPTEEHEDEPEPDGRRGHRPVVSD---GHRGRRRRCRNSDLR 87
>01_06_0963 + 33441731-33442096,33442175-33442270
Length = 153
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 314 VDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGH 204
VDC P P + L G ++ LR +QFG+
Sbjct: 89 VDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQFGN 125
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 315 DVLPEGD-GRGAHRRVEGFHLLGGPGDQR 398
D+LPEG GRG R ++G++L+ D+R
Sbjct: 383 DILPEGHPGRGRSRVMKGWYLIYSSTDER 411
>01_01_1005 + 7968862-7969755
Length = 297
Score = 28.3 bits (60), Expect = 7.6
Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Frame = +3
Query: 84 LAVPRVELRVVLADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVA------- 242
L VP R LA + + Q G +Q EA + P+L P H +A
Sbjct: 94 LEVPAARARWQLAADRERDEAQLTVGDAEIQGEEAVREIHPPDLLGPHHHAIAAPWTVAR 153
Query: 243 --LEREVVPGD-GKGDSRQVRYEAAVHDVLPEGDGRGAHRRV---------EGFHLLGGP 386
+E +V PG G+G Q A + GD G R +G +G
Sbjct: 154 RVVELQVAPGSRGRGVQEQRGVVGADDRGVEIGDEVGVARDAGEAGVAGVEDGEAGVGEA 213
Query: 387 GDQRRARVGDGRAALGTEAASV 452
G RARV D LG +A +V
Sbjct: 214 GGLVRARVAD-EVRLGEQAMAV 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,943,472
Number of Sequences: 37544
Number of extensions: 448360
Number of successful extensions: 1807
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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