Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_D04
         (779 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131808-1|AAI31809.1|  337|Homo sapiens LOC155036 protein protein.    31   4.7  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   4.7  
BC024243-1|AAH24243.3|  410|Homo sapiens FAM82A protein protein.       30   8.1  
AY358269-1|AAQ88636.1|  410|Homo sapiens PYST9371 protein.             30   8.1  
AK222854-1|BAD96574.1|  698|Homo sapiens GLE1-like, RNA export m...    30   8.1  
AF450129-1|AAM81211.1|  286|Homo sapiens BLOCK18 protein.              30   8.1  
AF435956-1|AAM20907.1|  265|Homo sapiens unknown protein.              30   8.1  

>BC131808-1|AAI31809.1|  337|Homo sapiens LOC155036 protein protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 530 PGSPDRPTCLLEDGRQCRRRRSPAEP 453
           P SPD+    +E GR+ R+ R P EP
Sbjct: 81  PSSPDKAKLAVEKGRKARKLRGPKEP 106


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 530 PGSPDRPTCLLEDGRQCRRRRSPAEP 453
           P SPD+    +E GR+ R+ R P EP
Sbjct: 833 PSSPDKAKLAVEKGRKARKLRGPKEP 858


>BC024243-1|AAH24243.3|  410|Homo sapiens FAM82A protein protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 86  FYSIKSLGTNASDRRIRPISNTYTDLQINSNRIKILNYLALRSTVSKPD 232
           F   + L    S+     ++  YTDL+ N N +K  N   L  TV+K D
Sbjct: 346 FLKAEELCPGYSNPNYMYLAKCYTDLEENQNALKFCNLALLLPTVTKED 394


>AY358269-1|AAQ88636.1|  410|Homo sapiens PYST9371 protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 86  FYSIKSLGTNASDRRIRPISNTYTDLQINSNRIKILNYLALRSTVSKPD 232
           F   + L    S+     ++  YTDL+ N N +K  N   L  TV+K D
Sbjct: 346 FLKAEELCPGYSNPNYMYLAKCYTDLEENQNALKFCNLALLLPTVTKED 394


>AK222854-1|BAD96574.1|  698|Homo sapiens GLE1-like, RNA export
           mediator isoform 1 variant protein.
          Length = 698

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -1

Query: 554 SASALVQPPGSPDRPTCLLEDGRQCRRRRSPAEPPGTVLSSRSRHC-SFRLQCSR 393
           SASAL QPP  P  P     D        SPA P GT     S+H  S  LQ SR
Sbjct: 75  SASALDQPPFVPKSP-----DASSAFSPASPATPNGTKGKDESQHTESMVLQSSR 124


>AF450129-1|AAM81211.1|  286|Homo sapiens BLOCK18 protein.
          Length = 286

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 86  FYSIKSLGTNASDRRIRPISNTYTDLQINSNRIKILNYLALRSTVSKPD 232
           F   + L    S+     ++  YTDL+ N N +K  N   L  TV+K D
Sbjct: 222 FLKAEELCPGYSNPNYMYLAKCYTDLEENQNALKFCNLALLLPTVTKED 270


>AF435956-1|AAM20907.1|  265|Homo sapiens unknown protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 86  FYSIKSLGTNASDRRIRPISNTYTDLQINSNRIKILNYLALRSTVSKPD 232
           F   + L    S+     ++  YTDL+ N N +K  N   L  TV+K D
Sbjct: 201 FLKAEELCPGYSNPNYMYLAKCYTDLEENQNALKFCNLALLLPTVTKED 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,324,860
Number of Sequences: 237096
Number of extensions: 2016680
Number of successful extensions: 4588
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4586
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)