Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_C21
         (826 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504...    33   0.36 
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058...    33   0.36 
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287...    30   1.9  
08_02_0225 + 14469037-14469064,14470004-14470215,14470324-144704...    30   2.6  
07_01_0724 + 5529642-5531141                                           30   2.6  
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157...    30   2.6  

>09_02_0152 +
           5040845-5041001,5042645-5042757,5043556-5043816,
           5043954-5044058,5044726-5044791,5044882-5044999,
           5045018-5045103,5045900-5046424,5046534-5047115,
           5047203-5047385,5049326-5049392,5049685-5049791,
           5049977-5050076,5050228-5050313,5050394-5050485,
           5050591-5050705,5050792-5050983
          Length = 984

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 298 SSPYYQNGHNDVNIVYYDQVSRPGPELLIAKQNALAAHTQL-WQNTVKRPFFYSENS 131
           S  Y  +G N   +V+YD   +P P  ++   N+  A T L WQ +  +P   +ENS
Sbjct: 267 SLAYNDDGTNSGRVVFYDVRGKPQPLTILRAYNSSEAVTGLCWQRS--KPVIVNENS 321


>06_03_1137 +
           27903012-27904196,27904330-27904542,27905775-27905867,
           27905940-27906008,27906412-27906612,27906688-27906834,
           27907524-27907652,27909001-27909131,27909240-27909333
          Length = 753

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
 Frame = -1

Query: 505 QGFFNEAEIKQEIDIPVDD-EKYLYERKDMEAEAVYSDSQRQI--IIEHIQNQVKQE 344
           + F  ++E ++EI + +   E +LYE  D E EAVY+    ++  +++ I+N+ K E
Sbjct: 593 RSFATDSE-REEISLSLQQTEDWLYEEGDDETEAVYNSKLEELKRLVDPIENRCKDE 648


>09_03_0041 +
           11826788-11828002,11828101-11828563,11828668-11828798,
           11829227-11829577,11829723-11829879,11829968-11830260,
           11830367-11830426,11830530-11830619,11830774-11830857
          Length = 947

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = -1

Query: 526 ERRMNGTQGFFNEAEIKQEIDIPVDDEKYLYERKDMEAEAVYSDSQRQIIIEHIQN 359
           E+ +   Q F + AE+  +++   D+E++L  R  ++ +A     +R++    +QN
Sbjct: 729 EKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQN 784


>08_02_0225 +
           14469037-14469064,14470004-14470215,14470324-14470433,
           14470498-14470765,14470878-14471087,14471162-14471230,
           14473346-14473591,14473672-14473740,14473808-14473871,
           14474468-14474583
          Length = 463

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -3

Query: 509 NPGFLQRGRDQTGNRHTGRR*KVFVRAERHGSGSGLQRQPETNNNRTHTEPSETGAG 339
           +PG +Q+GR  T   H G++          G G G  R P+ N +R    PS+ G G
Sbjct: 311 DPGIIQQGRGATV--HGGKK-SSSRNGPMSGPGRG-SRGPQKNTSRKEFPPSQNGVG 363


>07_01_0724 + 5529642-5531141
          Length = 499

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 329 VAQVRLLFHLVLYVFDYYLSLAVAVDRFRFHVFPLVQILFIVDR 460
           V QVR+L H  +  F  +      V+  RF   PLV + FI D+
Sbjct: 374 VPQVRVLAHAAVGAFLTHCGWGSTVESLRFGGLPLVMLPFIADQ 417


>02_05_0366 -
           28313190-28313601,28313759-28314225,28315044-28315782,
           28316548-28316615,28316693-28316757,28316922-28320162,
           28320239-28320301,28320756-28320824,28321020-28321055,
           28322035-28322280,28322531-28322569,28322695-28322816,
           28322921-28323004,28323100-28323235,28323486-28323535,
           28323620-28323756,28323863-28323951,28324847-28324954,
           28325080-28325163,28325841-28325888,28326036-28326153,
           28328262-28328347
          Length = 2168

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
 Frame = -1

Query: 529 DERRMNGTQGFFNE--AEIKQEIDIPVDDEKYLYERKDMEAEAVYSDSQ---RQIIIEHI 365
           DE     T+   NE  A ++ E D+P+DD   LY +  ++A +V  +S    R +  +  
Sbjct: 248 DEDEAQITEAERNEELAALQAEADLPLDDILKLYTKNKVQAFSVSRESSPDGRDVFSDSD 307

Query: 364 QNQVKQEP-DLSNGCEN 317
              + ++P + +NGC +
Sbjct: 308 SKDLIKDPLNQANGCND 324


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,532,382
Number of Sequences: 37544
Number of extensions: 395101
Number of successful extensions: 1179
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)