Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_C21
         (826 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical...    30   2.3  
AL132904-21|CAE54912.1|  133|Caenorhabditis elegans Hypothetical...    30   2.3  
AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine r...    30   2.3  
AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine re...    29   5.3  
AF106575-3|AAC78173.2|  287|Caenorhabditis elegans Hypothetical ...    28   9.3  
AF106575-2|AAQ62448.1|  506|Caenorhabditis elegans Hypothetical ...    28   9.3  

>Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical
           protein C38D4.5 protein.
          Length = 837

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 232 PGPELLIAKQNALAAHTQLWQNTVKRPFFYSENSHYTGSQLLHRXRGSXRG 80
           P P++L    ++   H Q   NT  RP    +++ +T S      RGS  G
Sbjct: 331 PMPQVLPTTSSSFDHHPQYHSNTPDRPILMEDSADFTPSSRCEERRGSGDG 381


>AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical
           protein Y111B2A.4 protein.
          Length = 459

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 280 NGHNDVNIVYYDQVSRPGPELLIAKQNALAAHTQLWQNTVKRPFFYSENSH 128
           N  NDV     ++V  P  E+++AK+ A  A  QL   T +     +E SH
Sbjct: 21  NEANDVLAEATEEVQDPDGEIIVAKKKAAEAEKQLAIETSRVELLGNEKSH 71


>AL132904-21|CAE54912.1|  133|Caenorhabditis elegans Hypothetical
           protein Y111B2A.28 protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = -1

Query: 376 IEHIQNQVKQEPDLSNGCENVCLQPQSSPYYQNGHNDVNIVYYDQVSRPGPELLIAKQNA 197
           +E  + + +++ D+ N  E++ + P S P++  G ND  +  Y+  S   P  +      
Sbjct: 1   MEEGRQEEEEDEDVGNCVESLAMAP-SHPWFAVGRNDGTMCIYEMDSN-SPRSIFQSNQM 58

Query: 196 LAAHTQLWQNTVKRPF 149
           +A    +W      P+
Sbjct: 59  MAIVKVIWSMEGNAPY 74


>AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine
           receptor, class z protein83 protein.
          Length = 314

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +2

Query: 320 FTAVAQVRLLFHLVLYVFDYYLSLAVAVDRFR-FHVFPLVQILFIVDRYVYFLFDLGLVE 496
           F  ++   LL +L+++ F  YL   +  DR +   +FP VQ  + + +  YFLF   ++ 
Sbjct: 22  FDLISYAFLLINLIIFPFYKYL-YEINRDRDKKMLLFPTVQHFYEMVQLAYFLFVFSIIL 80

Query: 497 ETL 505
            TL
Sbjct: 81  HTL 83


>AF016446-5|AAC24163.1|  329|Caenorhabditis elegans Serpentine
           receptor, class h protein22 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 299 LRLKTHVFTAVAQVRLLFHLVLYVFDYYLSLAVAVDRFRF 418
           L  KT+ FT   ++ + F   + VFD +L++  + D +RF
Sbjct: 121 LNYKTYRFTYFIKLSVYFIRCISVFDTFLAILTSQDAYRF 160


>AF106575-3|AAC78173.2|  287|Caenorhabditis elegans Hypothetical
           protein K04F1.14a protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 328 GCENVCLQPQSSPYYQN 278
           GC NV L P S P+Y+N
Sbjct: 54  GCSNVRLHPSSLPFYRN 70


>AF106575-2|AAQ62448.1|  506|Caenorhabditis elegans Hypothetical
           protein K04F1.14b protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 328 GCENVCLQPQSSPYYQN 278
           GC NV L P S P+Y+N
Sbjct: 169 GCSNVRLHPSSLPFYRN 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,045,368
Number of Sequences: 27780
Number of extensions: 324050
Number of successful extensions: 1116
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)