Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_C18
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21317-12|AAN60539.1| 697|Caenorhabditis elegans Hypothetical p... 32 0.53
U21317-11|AAN60538.3| 509|Caenorhabditis elegans Hypothetical p... 32 0.53
U21317-10|AAA62529.1| 753|Caenorhabditis elegans Hypothetical p... 32 0.53
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 29 3.7
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 29 5.0
AF047655-12|AAD34650.2| 171|Caenorhabditis elegans Hypothetical... 28 6.6
AF002198-1|AAF99929.1| 201|Caenorhabditis elegans Hypothetical ... 28 6.6
U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical pr... 28 8.7
>U21317-12|AAN60539.1| 697|Caenorhabditis elegans Hypothetical
protein B0495.10c protein.
Length = 697
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = -3
Query: 498 LSNFDASQYELLCVNRETGGRDTLSNYPTCNIAMAPSRTWLSAKDFLSDVSIAHTPLSLA 319
+ +FD S + LC R+ G RD + ++ WL+ K +++ ++ H P +
Sbjct: 554 MGDFDFSSLQKLCSKRKDGRRDVVQFIHLKSLLNGAEAPWLN-KSRIAETALRHVPQHMV 612
Query: 318 QLL 310
Q +
Sbjct: 613 QYM 615
>U21317-11|AAN60538.3| 509|Caenorhabditis elegans Hypothetical
protein B0495.10b protein.
Length = 509
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = -3
Query: 498 LSNFDASQYELLCVNRETGGRDTLSNYPTCNIAMAPSRTWLSAKDFLSDVSIAHTPLSLA 319
+ +FD S + LC R+ G RD + ++ WL+ K +++ ++ H P +
Sbjct: 316 MGDFDFSSLQKLCSKRKDGRRDVVQFIHLKSLLNGAEAPWLN-KSRIAETALRHVPQHMV 374
Query: 318 QLL 310
Q +
Sbjct: 375 QYM 377
>U21317-10|AAA62529.1| 753|Caenorhabditis elegans Hypothetical
protein B0495.10a protein.
Length = 753
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = -3
Query: 498 LSNFDASQYELLCVNRETGGRDTLSNYPTCNIAMAPSRTWLSAKDFLSDVSIAHTPLSLA 319
+ +FD S + LC R+ G RD + ++ WL+ K +++ ++ H P +
Sbjct: 554 MGDFDFSSLQKLCSKRKDGRRDVVQFIHLKSLLNGAEAPWLN-KSRIAETALRHVPQHMV 612
Query: 318 QLL 310
Q +
Sbjct: 613 QYM 615
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 720 YYLINKRIIKPDQCIKNFGDFFSGGSCLP-GVDKPENNPSGDDVSSLKKQCGSDSSPWKC 544
+YL+ +++ C +N D G+C+P G D ++ D + CG D S K
Sbjct: 714 FYLLRDKVVDGTPCDRNGDDICVAGACMPAGCDHQLHSTLRRDKCGV---CGGDDSSCKV 770
Query: 543 LQ 538
++
Sbjct: 771 VK 772
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 720 YYLINKRIIKPDQCIKNFGDFFSGGSCLP-GVDKPENNPSGDDVSSLKKQCGSDSSPWKC 544
+YL+ +++ C +N D G+C+P G D ++ D + CG D S K
Sbjct: 714 FYLLRDKVVDGTPCDRNGDDICVAGACMPAGCDHQLHSTLRRDKCGV---CGGDDSSCKV 770
Query: 543 LQ 538
++
Sbjct: 771 VK 772
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 435 HGLPSLGSHRATHIVKHQSLINQHSTQKRHRHDL 536
H P G H H H ++ QH Q++H ++
Sbjct: 1158 HQHPGAGGHLQLHPQMHMQMLPQHHQQQQHHEEM 1191
>AF047655-12|AAD34650.2| 171|Caenorhabditis elegans Hypothetical
protein C17B7.12 protein.
Length = 171
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 579 KQCGSDSSPWKCLQEDRGDVAFVSSADLSNF 487
K C + KC++ED F S D+ NF
Sbjct: 119 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 149
>AF002198-1|AAF99929.1| 201|Caenorhabditis elegans Hypothetical
protein F35F10.5 protein.
Length = 201
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 579 KQCGSDSSPWKCLQEDRGDVAFVSSADLSNF 487
K C + KC++ED F S D+ NF
Sbjct: 118 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 148
>U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical
protein F35D2.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 440 AVTLCPTILLVT*RWLHPEPGYQPRTFYQMSLL 342
+V+L P I + +WL P+P Y + YQ L
Sbjct: 319 SVSLYPYISKMPEQWLQPDPYYSTKDIYQQIFL 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,978,590
Number of Sequences: 27780
Number of extensions: 364625
Number of successful extensions: 1063
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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