Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_C15
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical p... 146 2e-35
Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 28 6.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.9
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 6.9
U42832-6|AAP40542.2| 342|Caenorhabditis elegans Hypothetical pr... 28 6.9
U42832-5|ABA03119.1| 468|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 28 6.9
Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical p... 28 9.1
Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H... 28 9.1
AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming ... 28 9.1
>Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical
protein Y57G11C.15 protein.
Length = 473
Score = 146 bits (353), Expect = 2e-35
Identities = 78/125 (62%), Positives = 82/125 (65%)
Frame = -2
Query: 719 GXXYYLSPPESLXTHXXXXXXXXXXXXXXX*ALAPSFQRPGSMCLAPQPKMWRNXLKEQQ 540
G YYLSPPESL H F + K LKEQQ
Sbjct: 337 GLCYYLSPPESLG-HIFEDPIHCIIYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQ 395
Query: 539 MVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYF 360
MVMRGHR+ SMIHELNRYIPTAAAFGGLCIGALSV ADF+GAIGSGTGILLAVTIIYQYF
Sbjct: 396 MVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTIIYQYF 455
Query: 359 EIFVQ 345
EIFV+
Sbjct: 456 EIFVK 460
>Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical
protein C55A1.5 protein.
Length = 361
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 461 GLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIF 351
GL I + VL F +I + T +LAV +Y+Y+ IF
Sbjct: 96 GLKIEIVQVLMAFYTSIYASTICMLAVQFVYRYWAIF 132
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 560 FATSLAEEPDTSIQVFEKKAQEPSM 634
FA SL + P+T++Q+F+ ++ P +
Sbjct: 1931 FADSLRDSPNTALQMFDSSSENPEL 1955
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 560 FATSLAEEPDTSIQVFEKKAQEPSM 634
FA SL + P+T++Q+F+ ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Frame = +2
Query: 422 GSRPALTEPRCTVLRTRPPSGCSGSVRGSWSCRGDRASPSAVPSXCFATSLAEEPDTSIQ 601
GS + P + + PS SGS + + + +++ S ATS + P T++
Sbjct: 960 GSTEGSSSPIPSTSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLT 1019
Query: 602 VFEKKAQEPSMKSTXSRACTGVXCNVCXG---TPAGTGSXXXRP 724
S + + + V + G TP TGS +P
Sbjct: 1020 SISPSPSPSSTIGSSQGSTSPVVSTISQGSTETPGSTGSTVTKP 1063
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 385 ASSIPVPEPMAPRKSASTDRAPMHSPP 465
A+ P PEP+ P K + AP S P
Sbjct: 206 AAETPAPEPLVPEKKPKIEDAPTTSSP 232
>U42832-6|AAP40542.2| 342|Caenorhabditis elegans Hypothetical
protein F01E11.5b protein.
Length = 342
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -2
Query: 572 KMWRNXLKEQQMVMRGHRDNSMIHELNRYIPTAAAF 465
+++R L V+R H +++++HE++ +PT+ F
Sbjct: 93 QIYRQKLAVSSHVIRKHIESTILHEISHVLPTSDEF 128
>U42832-5|ABA03119.1| 468|Caenorhabditis elegans Hypothetical
protein F01E11.5c protein.
Length = 468
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -2
Query: 572 KMWRNXLKEQQMVMRGHRDNSMIHELNRYIPTAAAF 465
+++R L V+R H +++++HE++ +PT+ F
Sbjct: 219 QIYRQKLAVSSHVIRKHIESTILHEISHVLPTSDEF 254
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 560 FATSLAEEPDTSIQVFEKKAQEPSM 634
FA SL + P+T++Q+F+ ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963
>Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -2
Query: 479 TAAAFGGLCIGAL--SVLADFLGAIGSGTGILLAVTIIYQYFEIFVQGT 339
T AFGGL GA+ ++ G + I+++ T+I F +F+QGT
Sbjct: 328 TIMAFGGLR-GAICFGLVLTIDGEVVPAKPIMISTTLIVIVFTVFIQGT 375
>Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical
protein B0035.11 protein.
Length = 430
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 552 EGTADGDAR-SPRQLHDPRTEPLHPDGG 472
E D D+R +PRQL D + +HP GG
Sbjct: 46 ESDDDDDSRPAPRQLSDSSDDNIHPRGG 73
>Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -2
Query: 479 TAAAFGGLCIGAL--SVLADFLGAIGSGTGILLAVTIIYQYFEIFVQGT 339
T AFGGL GA+ ++ G + I+++ T+I F +F+QGT
Sbjct: 328 TIMAFGGLR-GAICFGLVLTIDGEVVPAKPIMISTTLIVIVFTVFIQGT 375
>AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H
exchanger isoform 1 protein.
Length = 479
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -2
Query: 479 TAAAFGGLCIGAL--SVLADFLGAIGSGTGILLAVTIIYQYFEIFVQGT 339
T AFGGL GA+ ++ G + I+++ T+I F +F+QGT
Sbjct: 327 TIMAFGGLR-GAICFGLVLTIDGEVVPAKPIMISTTLIVIVFTVFIQGT 374
>AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming
growth factor betafamily protein 2 protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 78 RTRRHAHNTTPVGALPSTQQILNLKSNFFDK 170
R+RR A +TTP+ A P Q++ +S +F+K
Sbjct: 229 RSRRSA-STTPISAPPMRQKVKRSESAYFEK 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,510,106
Number of Sequences: 27780
Number of extensions: 342371
Number of successful extensions: 1112
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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