Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_C15
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   4.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 491  GSVRGSWSCRGDRASPSAVPSXCFATSLAEEPDTSIQVFEKKAQEPSM 634
            G + G W     R++  A    C  + +   P+T +   EK  Q+P M
Sbjct: 1222 GRLLGFWRVEMPRSN--ADYEVCIGSQIMVSPETLLSYDEKMDQKPKM 1267


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LAHHPRTRRHAHNTTPVGALPSTQ 134
           +  H +++ H H T+P    PS+Q
Sbjct: 663 IVQHTQSQLHLHLTSPPARSPSSQ 686


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 537 GDARSPRQLHDPRTEPLHP 481
           G A SP  +HD RT   HP
Sbjct: 377 GMALSPVDIHDDRTLFFHP 395


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,881
Number of Sequences: 438
Number of extensions: 4507
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)