Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_C09
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421           34   0.11 
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158...    30   2.4  
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19...    29   4.2  
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906...    29   4.2  
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170...    28   7.4  

>03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421
          Length = 927

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = -2

Query: 403 QLKSLLQAK---INSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQRLMK 233
           QLKS LQA+   +++   E+ + RS  A+   Q   + N    ++ +   E    QR+M+
Sbjct: 561 QLKSALQAERKALSALYSELEEERSAAAIATNQTMAMINRLQEEKAAMQMEALQYQRMME 620

Query: 232 ENALLEQKRLNLINQIFQER 173
           E +  +Q+ L L+N++  +R
Sbjct: 621 EQSEYDQEALQLLNELVTKR 640


>09_01_0102 +
           1582793-1582898,1582988-1583093,1584115-1584172,
           1584676-1584745,1585132-1585197,1586374-1586429,
           1587992-1588078,1588819-1589139,1589827-1589946,
           1590747-1590881,1591529-1591605,1591681-1591756,
           1592800-1592874,1592971-1593075,1593299-1593374,
           1594482-1594617,1594702-1594804,1595186-1595298,
           1596907-1597111,1597173-1597301,1597403-1597517,
           1597710-1597795,1599108-1599203,1599615-1599751,
           1600374-1600476,1601809-1601888,1602013-1602091,
           1602241-1602298,1602489-1602586,1602673-1602767,
           1602861-1602918
          Length = 1074

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 25/116 (21%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
 Frame = -2

Query: 403 QLKSLLQAKINSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQRLMKENA 224
           +L + L  KI   + EI  +   ++ + +   +++   D +E+  +  + LK++ ++E  
Sbjct: 649 RLCTSLGEKIAEMESEIADMERIISQRTR---DMKKPNDKREDIELKIKNLKRKRVEEER 705

Query: 223 LLEQKRLNL---------INQIFQERVA-----CIQLKIELAMKEILSKS*NLRVS 98
           LLE K++ L         IN++     +      +Q+++++  KE+L +  NLR++
Sbjct: 706 LLESKKVQLDDIRKTSADINRVTSSDTSELEAEMMQVEVDIEQKELLVQKTNLRLT 761


>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
            196685-196780,197248-197399,198683-198823,199068-199319,
            199463-199603,199686-200003,200146-200232,201025-202006,
            202091-202179,202968-203072,203155-204306,204844-205359,
            205455-205650,206299-207182
          Length = 1979

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -2

Query: 289  DAKENSSVDEQELKQRLMKENAL--LEQKRLNLINQIFQERVACIQLK 152
            + KE  SV E   ++ ++++  L  + +KR+NLIN +F  R   IQ K
Sbjct: 1179 EQKELISVLETHREEHVLRDELLERITEKRINLINMVFSLREKNIQDK 1226


>02_03_0313 -
           17590109-17590148,17590254-17590382,17590479-17590612,
           17590779-17590841,17590920-17591070,17593372-17593424,
           17593483-17593629,17593839-17594163,17594240-17594409,
           17595252-17595453,17596065-17596273,17597051-17597260,
           17597360-17597489,17599664-17600402,17600411-17600531
          Length = 940

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 23/89 (25%), Positives = 44/89 (49%)
 Frame = -2

Query: 388 LQAKINSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQRLMKENALLEQK 209
           ++  +NS++ E  KL        + + +LQ +K+ KE  S +  + K+ L  ++ L    
Sbjct: 592 IKGYLNSKKGE--KLNELQEKHTQLQSDLQKSKERKEEKSAELSKNKELLKSQDQLKRNI 649

Query: 208 RLNLINQIFQERVACIQLKIELAMKEILS 122
             NL  +  ++ V  +  +IEL   +ILS
Sbjct: 650 DDNLNYRRTKDEVERLTHEIELLEDKILS 678


>12_02_0248 +
           16413295-16414394,16416511-16416762,16416839-16417055,
           16417216-16417353,16417493-16417669,16417744-16417851,
           16417925-16418392,16418493-16418570,16418673-16418756
          Length = 873

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -2

Query: 325 KNKQECNLQNNKDAKENSSVDEQELKQR-LMKENALLEQKRLNLINQIFQERVACIQLKI 149
           + +QE   +  ++ +E +   EQ+ K+R L ++   LE+      +  F+  +  IQLK+
Sbjct: 767 RERQEWEQEKERECEERAREKEQDRKERELERKERELEKIAFEQKSSFFEVALRAIQLKL 826

Query: 148 EL 143
            +
Sbjct: 827 NI 828


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,146,685
Number of Sequences: 37544
Number of extensions: 203721
Number of successful extensions: 736
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)