Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_C09
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 33 0.31
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 31 0.71
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 31 0.71
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 1.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.6
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL033514-36|CAH19095.1| 222|Caenorhabditis elegans Hypothetical... 29 3.8
U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = -2
Query: 349 KLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQR--LMKENALLEQKR-LNLINQIFQ 179
KL ++ L +Q+ ++A+E + + QE QR MKE LLE+KR + N+I +
Sbjct: 2536 KLAAHHQLVEQQKQRDAREREAREREAREHQERMQREAYMKEQQLLERKRAIEENNRIME 2595
Query: 178 ERVACIQLKIELAMKE 131
E+ + ++E A KE
Sbjct: 2596 EQQR--EREMEAARKE 2609
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 31.5 bits (68), Expect = 0.71
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = -2
Query: 418 NAEYLQLKSLLQAKINSEQFEIVKLRSYVALKNKQ-EC--NLQNNKDAKENSSVDEQELK 248
N E QLK L+ + SE+ E K S + K K+ E QN + EQ K
Sbjct: 203 NKELAQLKKELRQAL-SERDEKDKHLSDLRDKVKEIEIFNETQNTLAEGQKMMRKEQIEK 261
Query: 247 QRLMKENALLEQKRLNLINQIFQERVACIQLKIELAMK 134
+ L KE LLE+K +NQ+ QE + + ++L +
Sbjct: 262 EALEKEKKLLEKKHAVRVNQLIQETMTAREEAVKLTSR 299
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.71
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = -2
Query: 418 NAEYLQLKSLLQAKINSEQFEIVKLRSYVALKNKQ-EC--NLQNNKDAKENSSVDEQELK 248
N E QLK L+ + SE+ E K S + K K+ E QN + EQ K
Sbjct: 203 NKELAQLKKELRQAL-SERDEKDKHLSDLRDKVKEIEIFNETQNTLAEGQKMMRKEQIEK 261
Query: 247 QRLMKENALLEQKRLNLINQIFQERVACIQLKIELAMK 134
+ L KE LLE+K +NQ+ QE + + ++L +
Sbjct: 262 EALEKEKKLLEKKHAVRVNQLIQETMTAREEAVKLTSR 299
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/99 (30%), Positives = 47/99 (47%)
Frame = -2
Query: 415 AEYLQLKSLLQAKINSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQRLM 236
AE L+L+ Q K +E + VK +A K K E K A E ++EQ+ K
Sbjct: 9873 AEKLELEKQAQIKKAAEA-DAVKKEKELAEKQKLESEAATKKAAAEKLKLEEQKKKDA-- 9929
Query: 235 KENALLEQKRLNLINQIFQERVACIQLKIELAMKEILSK 119
E A +E+++ QE++A Q K+E+ K+ K
Sbjct: 9930 -ETASIEKQKE-------QEKLAQEQSKLEVDAKKSAEK 9960
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/99 (30%), Positives = 47/99 (47%)
Frame = -2
Query: 415 AEYLQLKSLLQAKINSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQRLM 236
AE L+L+ Q K +E + VK +A K K E K A E ++EQ+ K
Sbjct: 9893 AEKLELEKQAQIKKAAEA-DAVKKEKELAEKQKLESEAATKKAAAEKLKLEEQKKKDA-- 9949
Query: 235 KENALLEQKRLNLINQIFQERVACIQLKIELAMKEILSK 119
E A +E+++ QE++A Q K+E+ K+ K
Sbjct: 9950 -ETASIEKQKE-------QEKLAQEQSKLEVDAKKSAEK 9980
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/99 (30%), Positives = 47/99 (47%)
Frame = -2
Query: 415 AEYLQLKSLLQAKINSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQRLM 236
AE L+L+ Q K +E + VK +A K K E K A E ++EQ+ K
Sbjct: 9893 AEKLELEKQAQIKKAAEA-DAVKKEKELAEKQKLESEAATKKAAAEKLKLEEQKKKDA-- 9949
Query: 235 KENALLEQKRLNLINQIFQERVACIQLKIELAMKEILSK 119
E A +E+++ QE++A Q K+E+ K+ K
Sbjct: 9950 -ETASIEKQKE-------QEKLAQEQSKLEVDAKKSAEK 9980
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = -2
Query: 388 LQAKINSEQFEIVKLRSYVALKNKQE-----CNLQNNKDAKENSSVDEQELKQRLMKENA 224
+QA+++ + EI K +A Q L+N + E SS E+E QR+ K A
Sbjct: 51 MQAELDLARTEIDKTNQTLAEYRSQHQRSTRSELENEESLLEESSAKEEEYLQRIAKLEA 110
Query: 223 LLEQKRLNLINQIFQERVACIQLK 152
L++K L + +E + I+ K
Sbjct: 111 DLKKKEQELAEK--KEELESIEKK 132
>AL033514-36|CAH19095.1| 222|Caenorhabditis elegans Hypothetical
protein Y75B8A.39 protein.
Length = 222
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 205 LNLINQIFQERVACIQLKIELAMKEILSKS*NLRVS 98
L+L+NQI+ RV+CIQ I + I+ N+ VS
Sbjct: 177 LDLLNQIYNLRVSCIQYVITFQLPLIMHIPCNVAVS 212
>U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical
protein ZC196.5 protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -2
Query: 400 LKSLL---QAKINSEQFEIVKLRSYVALKNKQECNLQNNKDAKENSSVDEQELKQR 242
++SLL Q + SEQ EI K R A+KN QE L ++ A SS E+++ ++
Sbjct: 255 MRSLLVADQMERASEQMEITKQRKSKAVKNNQE--LDDDWGAYTTSSNAEEKISKK 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,682,512
Number of Sequences: 27780
Number of extensions: 193528
Number of successful extensions: 1001
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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