Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_C06
(770 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. 48 4e-05
M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonu... 48 4e-05
CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. 48 4e-05
BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. 48 4e-05
BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. 48 4e-05
BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. 48 4e-05
BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. 48 4e-05
AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. 48 4e-05
AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor ... 48 4e-05
AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. 48 4e-05
BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein. 43 0.001
AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens ... 43 0.001
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 35 0.37
>M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro
ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
).
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor
variant protein.
Length = 406
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 306 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 346
>AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 48.0 bits (109), Expect = 4e-05
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 594
DLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein.
Length = 384
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKK 597
+LWQV+SGTIFD+FLITDD A G+ +G ++
Sbjct: 303 ELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPER 341
>AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ25355 fis, clone TST01593. ).
Length = 384
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1
Query: 713 DLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKK 597
+LWQV+SGTIFD+FLITDD A G+ +G ++
Sbjct: 303 ELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPER 341
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 34.7 bits (76), Expect = 0.37
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Frame = +2
Query: 74 LYNNNHNHTKH*GYYIECYCTVKLYIHVPAHGARPITKH*----IITYINSERNPHLHGH 241
L+ + H HT + I Y + H H + H ++T + H H H
Sbjct: 56 LHTHTHTHTLSLYWLISLYIHTHTHTHTHTHAVLYLPTHTHTHAVLTLAYLPIHTHTHTH 115
Query: 242 QYETTDTYLLTHNMSLRIGKIRAKHTHS 325
+ + T L TH +SL HTH+
Sbjct: 116 THTLSCTSLYTHTLSLHWLTCLYTHTHA 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,233,021
Number of Sequences: 237096
Number of extensions: 1570103
Number of successful extensions: 2810
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2805
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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