Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_C05
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 280 9e-76
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 280 9e-76
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 280 9e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 280 9e-76
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 280 9e-76
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 280 9e-76
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 279 2e-75
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 279 2e-75
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 279 2e-75
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 273 1e-73
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 268 4e-72
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 144 6e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 124 9e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 119 2e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 5e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 6e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 78 6e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.70
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.6
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.6
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.6
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 280 bits (686), Expect = 9e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 280 bits (686), Expect = 9e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 280 bits (686), Expect = 9e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 280 bits (686), Expect = 9e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 200 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 259
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 260 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 319
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 320 DESGPSIVHRKCF 332
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 179 DFEQEMATAASSSSLEKSYELP 200
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 280 bits (686), Expect = 9e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 230 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 289
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 290 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 349
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 350 DESGPSIVHRKCF 362
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 209 DFEQEMATAASSSSLEKSYELP 230
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 280 bits (686), Expect = 9e-76
Identities = 128/133 (96%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 279 bits (684), Expect = 2e-75
Identities = 127/133 (95%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 279 bits (684), Expect = 2e-75
Identities = 127/133 (95%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 279 bits (684), Expect = 2e-75
Identities = 127/133 (95%), Positives = 132/133 (99%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 273 bits (669), Expect = 1e-73
Identities = 126/133 (94%), Positives = 131/133 (98%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE EMAT ASS SLEKSY P
Sbjct: 223 DFEQEMATAASSSSLEKSYELP 244
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 268 bits (656), Expect = 4e-72
Identities = 123/133 (92%), Positives = 127/133 (95%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGG
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGG 302
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
T+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 303 TSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 333 DESGPSIVHRKCF 295
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3
Query: 755 DFEXEMATXASSXSLEKSYXFP 690
DFE E+A ASS SLEKSY P
Sbjct: 222 DFESELAAAASSSSLEKSYELP 243
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 144 bits (349), Expect = 6e-35
Identities = 66/133 (49%), Positives = 89/133 (66%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGG
Sbjct: 242 PDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGG 301
Query: 513 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 334
TT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY
Sbjct: 302 TTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEY 361
Query: 333 DESGPSIVHRKCF 295
++ G S +H++ F
Sbjct: 362 EDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 124 bits (298), Expect = 9e-29
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 13/137 (9%)
Frame = -2
Query: 693 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 514
PDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSGG
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGG 306
Query: 513 TTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL-- 373
TTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 307 TTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMK 366
Query: 372 STFQQMWISKQEYDESG 322
Q W+SK+EY+E G
Sbjct: 367 DRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 119 bits (287), Expect = 2e-27
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Frame = -2
Query: 726 IQQXPREVLRXPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCD 562
+ + P P+G G ER + PE LF +L E + + S D
Sbjct: 285 VDKLPSTPYAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLAD 344
Query: 561 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGG 391
+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGG
Sbjct: 345 IDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGG 404
Query: 390 SILASLSTFQQMWISKQEYDESGPSIVHRKC 298
SIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 405 SILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -2
Query: 672 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 493
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 492 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 337
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 5e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -2
Query: 678 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 502
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 501 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 370
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 369 TFQQMWISKQEYDESGPSI 313
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 78.2 bits (184), Expect = 6e-15
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Frame = -2
Query: 741 DGHRCIQQXPREVLRXPDGQV--ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 568
D H + ++V D Q+ I +G ERF PE LF PS + ++ CG+ E SI +
Sbjct: 240 DFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQ 299
Query: 567 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWI 397
C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W
Sbjct: 300 CPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWH 357
Query: 396 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 289
G L L+ + WI+++++DE G S+ F T
Sbjct: 358 CGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 78.2 bits (184), Expect = 6e-15
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Frame = -2
Query: 741 DGHRCIQQXPREVLRXPDGQV--ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 568
D H + ++V D Q+ I +G ERF PE LF PS + ++ CG+ E SI +
Sbjct: 240 DFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQ 299
Query: 567 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWI 397
C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W
Sbjct: 300 CPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWH 357
Query: 396 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 289
G L L+ + WI+++++DE G S+ F T
Sbjct: 358 CGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 576 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 412
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 411 ----YSVWIGGSILASL-STFQQMWISKQEY 334
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 339 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 238
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 420 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 259
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,096,473
Number of Sequences: 27780
Number of extensions: 339477
Number of successful extensions: 1066
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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