Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_C04
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    30   0.089
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   0.63 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    26   1.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   1.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.7  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 0.089
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 351 QQMLTIDFHGEGITSCNKNQTRKIIICVMTG 259
           QQ L+I  H EG+    +   RK ++C +TG
Sbjct: 118 QQALSIVHHPEGVMGPTRRMIRKPLVCAITG 148


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 50  LTAHHLMLSGYWNPLTSTTQMRHPPRDISSTV 145
           L  HHL L+     +T  + ++ PP DI+ TV
Sbjct: 703 LREHHLELAHAKTEMTVISSLQQPPEDITITV 734


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 35  SRMDE-LTAHHLMLSGYWNPLTSTTQMRHPPRDISSTV 145
           S +D+ +  HHL L+     +T  + ++HPP  IS  V
Sbjct: 702 SAVDQWMQQHHLELAPAKTEMTIISSLKHPPSHISIDV 739


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -1

Query: 182  GSKGGAAVVTILRP*NLCLEVGGAFAL*MSMGSSNHLTSGGG 57
            GS GG AVV   RP +L L +    +      S   L+SGGG
Sbjct: 982  GSNGGYAVV---RPQSLSLSMNSMGSDNSEQSSGGRLSSGGG 1020


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 367 RKIGTRLRDSNTGASLRTNALDVLSFXATTT 459
           R+ GTR R  +  A L   ALDV SF    T
Sbjct: 230 RESGTRWRTRHFDAELFGVALDVASFTERVT 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,392
Number of Sequences: 2352
Number of extensions: 15700
Number of successful extensions: 82
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)