Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_C02
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 266 2e-72
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 263 2e-71
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 212 6e-56
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 155 5e-39
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 134 1e-32
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.061
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.081
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.14
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.19
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.43
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.75
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 1.7
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.7
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.3
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.0
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 27 3.0
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.0
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 4.0
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.0
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 5.3
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.3
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 5.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.3
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 26 5.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 5.3
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.3
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 5.3
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.3
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.3
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 7.0
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 7.0
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 7.0
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 7.0
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 9.3
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 9.3
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 9.3
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.3
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 9.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.3
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 266 bits (652), Expect = 2e-72
Identities = 132/206 (64%), Positives = 154/206 (74%)
Frame = -3
Query: 656 GDKXEEVQXXXXXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQ 477
GD E+ Q +GIETAGGVMT LIKRN TYSDNQPGVLIQ
Sbjct: 380 GDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQ 439
Query: 476 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKI 297
VFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KI
Sbjct: 440 VFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKI 499
Query: 296 TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 117
TITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K
Sbjct: 500 TITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDK 559
Query: 116 ISDSDKQTILDKCNDTIKWLDSNQLA 39
+ SDK+T+ +TI+WLDSN A
Sbjct: 560 VDASDKETVDKAVKETIEWLDSNTTA 585
Score = 30.7 bits (66), Expect = 0.25
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -1
Query: 775 IPXVXKXXQDFFNGKELNKXXNP 707
IP V K DFFNGKE K NP
Sbjct: 341 IPRVQKLVSDFFNGKEPCKSINP 363
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 263 bits (644), Expect = 2e-71
Identities = 131/206 (63%), Positives = 153/206 (74%)
Frame = -3
Query: 656 GDKXEEVQXXXXXXXXXXXLGIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQ 477
GD E+ Q LGIETAGGVMT LIKRN TY+DNQPGVLIQ
Sbjct: 380 GDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQ 439
Query: 476 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKI 297
VFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KI
Sbjct: 440 VFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKI 499
Query: 296 TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 117
TITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K
Sbjct: 500 TITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDK 559
Query: 116 ISDSDKQTILDKCNDTIKWLDSNQLA 39
+ SDK+ I +TI+WLD N A
Sbjct: 560 VDASDKEAIDKAVKETIEWLDHNTTA 585
Score = 30.3 bits (65), Expect = 0.33
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 775 IPXVXKXXQDFFNGKELNKXXNP 707
IP + K DFFNGKE K NP
Sbjct: 341 IPRIQKLVSDFFNGKEPCKSINP 363
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 212 bits (517), Expect = 6e-56
Identities = 106/183 (57%), Positives = 130/183 (71%), Gaps = 2/183 (1%)
Frame = -3
Query: 596 GIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 417
GIET GGVMT LI RN T DNQ VLIQV+EGER +TKDNNLLGKF+L
Sbjct: 429 GIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDL 488
Query: 416 TGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMVN 240
GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV
Sbjct: 489 RGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVK 548
Query: 239 EAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCNDTIK 63
EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD D +
Sbjct: 549 EAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAE 608
Query: 62 WLD 54
WL+
Sbjct: 609 WLE 611
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 155 bits (377), Expect = 5e-39
Identities = 81/175 (46%), Positives = 110/175 (62%)
Frame = -3
Query: 596 GIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 417
GIET GGV T LI RN T +D Q V I+VF+GER + +DN L+G F+L
Sbjct: 443 GIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQL 502
Query: 416 TGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 237
TGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +
Sbjct: 503 TGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVAD 561
Query: 236 AEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 72
AEKYR D +KE I+ N ES C ++S ++ K+K+ + + K D
Sbjct: 562 AEKYRASDMARKEAIENGNRAESVCTDIESNLDIH--KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 134 bits (325), Expect = 1e-32
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Frame = -3
Query: 596 GIETAGGVMTTLIKRNXXXXXXXXXXXXTYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 417
G+ G V + RN T +DNQ V V++GER +N LG+F+L
Sbjct: 405 GVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQL 464
Query: 416 TGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 237
TGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+
Sbjct: 465 TGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIEN 524
Query: 236 AEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI---LDKCNDTI 66
A+K++ +D + ++AK+ LESY ++++T+ + + K+ DK I L +C +
Sbjct: 525 ADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQL 584
Query: 65 KWLDSN 48
+ D+N
Sbjct: 585 ELEDTN 590
Score = 30.3 bits (65), Expect = 0.33
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 775 IPXVXKXXQDFFNGKELNKXXNP 707
IP V + DFF+G+ LNK NP
Sbjct: 345 IPKVQRLVSDFFDGRALNKSINP 367
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.061
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 323 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 147
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 146 TMED 135
++D
Sbjct: 593 KLDD 596
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.081
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 263 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 84
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 83 K 81
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.11
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Frame = -3
Query: 389 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK------ 228
+ ++ +F + N + +I K+ N+E +K R+ E+ ++++ +K
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEER---FEKEKRRIMSEDRDKLIRGRQKTSIVAK 1269
Query: 227 YRN-------EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDT 69
YRN DDKQ + KN+LE+ M+ + E K D ++ LDK D
Sbjct: 1270 YRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDL 1328
Query: 68 IK 63
K
Sbjct: 1329 EK 1330
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 359 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 186
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 185 KNA 177
+A
Sbjct: 118 LDA 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.19
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -3
Query: 314 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 135
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 134 EKLKEKISD 108
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.43
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -3
Query: 269 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 102
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.75
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 281 KGRLSKEEIERMVNEAEKYRNEDD 210
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = -3
Query: 335 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 156
S+I+K K T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 155 MKSTMEDEKLKEKISDSDKQ--TILDK 81
+ +E EK KEK D D++ T+ DK
Sbjct: 266 NSAKLEKEKAKEKQKDKDQEQDTVSDK 292
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 344 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 213
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 351 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 247
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 334 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 471
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 353 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 177
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 176 LESYCFSMKSTMEDE-KLKEKISDSDK 99
++ S ED ++E + + K
Sbjct: 214 VDMIFASFIRRAEDVIHIREVLGEEGK 240
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -3
Query: 299 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 120
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 119 KISDSDKQTILDKCNDTIK 63
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 248 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 144
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 338 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 177
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 218 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 57
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 308 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 138
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -3
Query: 353 NGILNVSAIEK-STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 177
NG + S K ST+ + + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 176 LESYCFSMKSTMEDEKLKEKISDSD 102
S+ ++ +T++ + KI +S+
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNSN 458
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -3
Query: 266 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 114
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 113 SDSDKQTILDKCND 72
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 5.3
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -3
Query: 326 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 147
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 146 TMEDEKLKEKISDSDK 99
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 263 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 93
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 5.3
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = -3
Query: 344 LNVS--AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 171
+NVS +EK T + +I + + + + M+++ +K R+ DDK E IQA +
Sbjct: 288 INVSEHTVEKVTIFDIRINTEDPRHSQIRSFLATMMSQ-DKIRSIDDKLTELIQAITYSQ 346
Query: 170 SYCFSMKSTMED--EKLKEKISDS--DKQTILDKCN 75
S MK E E + E I D + +LD N
Sbjct: 347 SKYDFMKKFSESPIEFINEWIESQSRDLEIVLDGTN 382
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 287 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 111
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 110 DSDKQT 93
+D+ T
Sbjct: 695 -TDRLT 699
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.3
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -3
Query: 338 VSAIEKSTNKENKITITNDKGRLSKEEI--ERMVNEAEKYRNEDDKQKETIQAKNALESY 165
V ++K +K++K N + E+ E ++EK ++ K + KNA ++
Sbjct: 70 VVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDAL 129
Query: 164 CFSMKSTMEDEKLKEKISDSDKQTILDKCND 72
M DE+ E S K+ K D
Sbjct: 130 ADDMDDLSLDEEESESSEKSKKKKKKSKSKD 160
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = -3
Query: 344 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN--EAEKYRNEDDKQKETIQAK-NAL 174
LNV +K N+IT T D S++E + N ++ D + + A
Sbjct: 10 LNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGF 69
Query: 173 ESYCFSMKSTMEDEKLKEKISDSDKQ 96
+ + SMKS ++ +++ D++
Sbjct: 70 DEFYDSMKSAEREQMELKRLESKDRR 95
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 299 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 123
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 122 EKISDSDKQTILDKC 78
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 550 TLPSPLNRLRHSPPTLITNPEYSSKYLR 467
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 269 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 147
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -3
Query: 263 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKE 120
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKE 538
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 281 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 171
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 266 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 87
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 86 D 84
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 320 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 159
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -3
Query: 266 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 87
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 86 DKC 78
D C
Sbjct: 754 DGC 756
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 389 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 228
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 9.3
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 305 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 129
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 128 LKEKISDSDK 99
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 185 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 60
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 323 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 195
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 353 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 213
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,545,006
Number of Sequences: 5004
Number of extensions: 46259
Number of successful extensions: 257
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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