Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B22
(815 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 97 2e-21
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 96 6e-21
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 75 9e-15
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 64 2e-11
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 59 9e-10
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 34 0.021
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 29 0.79
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.79
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 29 0.79
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.79
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 28 1.4
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.8
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 27 2.4
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.4
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 27 3.2
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 4.2
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 27 4.2
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.6
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.6
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 7.4
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 25 9.7
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 9.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 97.5 bits (232), Expect = 2e-21
Identities = 51/85 (60%), Positives = 61/85 (71%)
Frame = -3
Query: 708 GKFRAXPGXPPGAXVACLKLRSPXDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 529
GKF G PP A ++ D+DANGILNVSA+EK T K KITITNDKGRLSKEE
Sbjct: 455 GKFELS-GIPP-APRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEE 512
Query: 528 IERMVNEAEKYRNEDDKQKETIQAQ 454
I+RMV+EAEKY+ ED+ + IQA+
Sbjct: 513 IDRMVSEAEKYKAEDEAETSRIQAK 537
Score = 85.8 bits (203), Expect = 6e-18
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = -1
Query: 455 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 276
KN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKE
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKE 596
Query: 275 LEGIYNPIITKM 240
LEG+ NPI+ K+
Sbjct: 597 LEGVANPIMAKI 608
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 95.9 bits (228), Expect = 6e-21
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = -3
Query: 708 GKFRAXPGXPPGAXVACLKLRSPXDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 529
GKF G PP A ++ D+DANGILNVSA+EK T K KITITNDKGRLSKEE
Sbjct: 455 GKFELS-GIPP-APRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEE 512
Query: 528 IERMVNEAEKYRNEDDKQKETIQAQ 454
I+RMV EAEKY+ ED+ + IQA+
Sbjct: 513 IDRMVAEAEKYKAEDEAESGRIQAK 537
Score = 85.0 bits (201), Expect = 1e-17
Identities = 36/72 (50%), Positives = 54/72 (75%)
Frame = -1
Query: 455 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 276
KN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKE
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKE 596
Query: 275 LEGIYNPIITKM 240
LE + NPI+ K+
Sbjct: 597 LESVANPIMAKI 608
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 75.4 bits (177), Expect = 9e-15
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = -3
Query: 708 GKFRAXPGXPPGAXVACLKLRSPXDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKE 532
GKF G PP A ++ ++DANG+L VSA++KS K K+ I NDKGRLS+E
Sbjct: 484 GKFDLR-GIPP-APRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEE 541
Query: 531 EIERMVNEAEKYRNEDDKQKETIQAQECI 445
+IERMV EAE++ ED KE I+A+ +
Sbjct: 542 DIERMVKEAEEFAEEDKILKERIEARNTL 570
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = -1
Query: 455 KNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQ 282
+N LE+Y +S+K +D E+L K+ DKQ +LD D +WL+ + A KEE+E ++
Sbjct: 567 RNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQR 626
Query: 281 KELEGIYNPIITKM 240
++L+ + +PI K+
Sbjct: 627 QKLDAVVHPITQKL 640
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -3
Query: 636 DIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ 460
D+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+
Sbjct: 520 DVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIE 577
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 58.8 bits (136), Expect = 9e-10
Identities = 25/67 (37%), Positives = 44/67 (65%)
Frame = -3
Query: 654 KLRSPXDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 475
+L + ++DANGIL V+A+EK+T + I ITN G LS +I+ M+ A+K++ +D
Sbjct: 476 ELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDF 535
Query: 474 KETIQAQ 454
+ ++A+
Sbjct: 536 AKKLEAK 542
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 34.3 bits (75), Expect = 0.021
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -3
Query: 630 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 457
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 456 QECIGI 439
+ GI
Sbjct: 118 LDAFGI 123
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 413 MEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKM*P 234
+E EK KEK D D++ DT+ D NQ+ D+ E K+ + E + P + + P
Sbjct: 270 LEKEKAKEKQKDKDQE------QDTVS--DKNQI-DEIEKGQKEVDEEPVSEPTTSPILP 320
Query: 233 GCRRSPRRYAG 201
+ P R G
Sbjct: 321 PKNQEPIRMGG 331
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 552 KGRLSKEEIERMVNEAEKYRNEDD 481
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.79
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1
Query: 485 MTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQL 312
M+SK+R S P+ +L SY F KS+ +K + DSD + + I+W ++ L
Sbjct: 1 MSSKKRKSPPQESLTSY-FE-KSSKSSKKYGSQNKDSDSSSTCLQQKIEIQWSITDSL 56
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 395 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKEL-EGIYNPIITKM*PG--C 228
+EKI +++TI D K + + ++ EEY KQKEL E + P ++ P
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQEELEFPDEVELQPNELA 486
Query: 227 RRSPRRYAGL 198
R ++Y GL
Sbjct: 487 RERFKKYRGL 496
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 261 QSDNYEDVTRVPEESPEVCRASRAEHPEPEVP 166
Q+D E + ++ ++ P RASRA EP+ P
Sbjct: 226 QNDTKEWLDKLGDKGPAAARASRAAAEEPQAP 257
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 615 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 484
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 432 AVRFQCILGPGWSPFACHPRFCTSLPH*PYARSLPWRDDL 551
A+ F+C++G W PF C+ H Y + + WR+ L
Sbjct: 320 AIMFECLIG--WPPF------CSENSHETYRKIINWRETL 351
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 622 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 518
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 267 HLQSDNYEDVTRVPEESPEVCRASRAEH-PEPEVPPPGLEALAPPSRRSVK 118
+L NY ++T P+ SP+ SR+ P VP G + PP+ S++
Sbjct: 416 NLNQPNYANLTPTPQVSPKRPTYSRSSPLPSASVPALGDGSPDPPAAPSIQ 466
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 585 NKENKITITNDKGRLSKEEIERMVNEAE 502
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 461 RPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 330
R K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 282 RRKEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -1
Query: 470 RPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEY 294
+ + PKNA ++ M DE+ E S K+ K +D + LD + E+
Sbjct: 118 KKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKD 177
Query: 293 EHKQKE 276
+ K+K+
Sbjct: 178 KKKKKK 183
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 225 EESPEVCRASRAEHPEPE 172
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 7.4
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = -3
Query: 264 LQSDNYEDVTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSVKPTFHTTLKPTC 85
L D+ D R+P P H +P +L+PPS R++KP H+ P+
Sbjct: 146 LPKDSNTDPLRLP---PIATEHDPFAHLRSSMPLVMANSLSPPSSRALKP-IHSLSNPST 201
Query: 84 NNHLVTS 64
+ L S
Sbjct: 202 ASSLEPS 208
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -3
Query: 609 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 469
V A+ KS +++ ++ G + EEI ++++ E E+D++ E
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELE 643
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 594 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 466
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 624 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 484
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,553,121
Number of Sequences: 5004
Number of extensions: 46946
Number of successful extensions: 271
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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