Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B20
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0546 - 9381989-9383733,9385838-9386054 124 1e-28
11_08_0075 + 28173220-28173433,28175348-28177083 122 3e-28
05_05_0109 - 22454539-22456268,22457069-22457279 122 4e-28
03_06_0484 + 34233042-34233258,34235317-34237049 121 8e-28
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 120 1e-27
03_02_0540 + 9340379-9340592,9341250-9342988 118 5e-27
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 107 1e-23
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 99 4e-21
08_01_0654 - 5639419-5641449 89 5e-18
05_04_0392 - 20889699-20891726 88 7e-18
05_04_0052 - 17515344-17517353 80 2e-15
03_02_0542 - 9348126-9349585,9352433-9352655 80 2e-15
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 78 7e-15
11_01_0564 - 4447078-4448519,4449465-4449711 77 1e-14
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 73 3e-13
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 73 3e-13
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 71 1e-12
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 62 4e-10
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 61 9e-10
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 52 5e-07
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 36 0.050
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 35 0.088
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 34 0.12
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 32 0.62
04_03_0904 + 20717005-20718087 32 0.62
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 31 0.82
02_03_0360 + 18104948-18106159 31 0.82
06_03_0069 + 16179765-16179936,16179982-16180256 31 1.1
06_01_0107 - 854756-854883,855126-856968 31 1.1
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 1.1
11_06_0464 + 23894893-23895077,23895148-23895706 31 1.4
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 30 2.5
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 30 2.5
04_04_0057 + 22410167-22411330 29 3.3
02_02_0503 + 11008475-11008793,11009983-11010140,11011863-110121... 29 3.3
11_06_0610 - 25449085-25453284 29 4.4
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335... 29 4.4
07_03_1282 - 25447736-25447813,25448670-25448744,25449212-254492... 29 4.4
03_06_0345 - 33281126-33281783,33281872-33282063,33282175-332822... 29 4.4
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 29 4.4
07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961 29 5.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 5.8
03_02_0342 - 7645323-7645909,7646323-7646491 29 5.8
01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371 29 5.8
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 28 7.6
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 7.6
07_01_0927 - 7784564-7784656,7785182-7785225,7785946-7785970,778... 28 7.6
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898... 28 7.6
03_05_0153 + 21299150-21299593,21299733-21299873,21299971-213000... 28 7.6
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 124 bits (298), Expect = 1e-28
Identities = 56/86 (65%), Positives = 74/86 (86%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
VT DIDANGILNVSA +K+T K+N+ITITNDKGRLSKEEIERMV EAEKY+ ED++ +
Sbjct: 483 VTFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIERMVQEAEKYKAEDEQVRHK 542
Query: 455 IQAKNALESYCFSMKSTMEDEKLQGK 378
++A+NALE+Y ++M++T+ DEK+ K
Sbjct: 543 VEARNALENYAYNMRNTVRDEKIASK 568
Score = 64.9 bits (151), Expect = 7e-11
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPGCRRSP 206
K+ DK+ I D D IKWLD NQLA+ +E+E K KELE + NPII+KM G P
Sbjct: 568 KLPADDKKKIEDAIEDAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMYQGGAGGP 625
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 122 bits (295), Expect = 3e-28
Identities = 54/86 (62%), Positives = 76/86 (88%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
V DIDANGILNVSA +K+T ++N+ITITNDKGRLSKEEIE+MV EAEKY++ED++ K+
Sbjct: 482 VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKK 541
Query: 455 IQAKNALESYCFSMKSTMEDEKLQGK 378
+++KNALE+Y ++M++T++DEK+ K
Sbjct: 542 VESKNALENYAYNMRNTIKDEKIASK 567
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPG 221
K+ +DK+ I D + I+WLD NQLA+ +E++ K KELEGI NPII KM G
Sbjct: 567 KLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQG 619
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 122 bits (293), Expect = 4e-28
Identities = 55/86 (63%), Positives = 74/86 (86%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
V DIDANGILNVSA +K+T ++N+ITITNDKGRLSKEEIE+MV EAEKY+ ED++ K+
Sbjct: 481 VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK 540
Query: 455 IQAKNALESYCFSMKSTMEDEKLQGK 378
+ AKNALE+Y ++M++T++DEK+ K
Sbjct: 541 VDAKNALENYAYNMRNTIKDEKIASK 566
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPG 221
K++ DK+ I D + I WLD+NQLA+ +E+E K KELEGI NPII KM G
Sbjct: 566 KLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQG 618
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 121 bits (291), Expect = 8e-28
Identities = 53/86 (61%), Positives = 75/86 (87%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
V DIDANGILNVSA +K+T ++N+ITITNDKGRLSKEEIE+MV +AEKY++ED++ K+
Sbjct: 483 VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKKK 542
Query: 455 IQAKNALESYCFSMKSTMEDEKLQGK 378
+ AKN+LE+Y ++M++T++DEK+ K
Sbjct: 543 VDAKNSLENYAYNMRNTIQDEKIASK 568
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPG 221
K+ DK+ I D I+WLD+NQLA+ EE+E K KELEG+ NPII KM G
Sbjct: 568 KLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMYQG 620
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 120 bits (290), Expect = 1e-27
Identities = 54/86 (62%), Positives = 74/86 (86%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
V DIDANGILNVSA +K+T ++N+ITITNDKGRLSKEEIE+MV EAEKY+ ED++ K+
Sbjct: 674 VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK 733
Query: 455 IQAKNALESYCFSMKSTMEDEKLQGK 378
+ AKNALE+Y ++M++T++D+K+ K
Sbjct: 734 VDAKNALENYAYNMRNTIKDDKIASK 759
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/64 (50%), Positives = 39/64 (60%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPGCRRSPRR 200
K+S DK+ I D + I WLDSNQLA+ +E+E K KELE I NPII KM G
Sbjct: 759 KLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGG 818
Query: 199 YAGL 188
AG+
Sbjct: 819 AAGM 822
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 118 bits (284), Expect = 5e-27
Identities = 52/86 (60%), Positives = 74/86 (86%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
V DIDANGILNVSA +K+T ++N+ITITNDKGRLSKE+IE+MV EAEKY+ ED++ K+
Sbjct: 482 VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKK 541
Query: 455 IQAKNALESYCFSMKSTMEDEKLQGK 378
+ AKN+LE+Y ++M++T++D+K+ K
Sbjct: 542 VDAKNSLENYAYNMRNTIKDDKIASK 567
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXPG 221
K+ ++DK+ I D + I WLDSNQLA+ EE+E K KELEG+ NPII KM G
Sbjct: 567 KLPEADKKKIEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQG 619
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 107 bits (256), Expect = 1e-23
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EVT ++DANGILNV A +K T K +ITITN+KGRLS+EEI+RMV EAE++ ED K KE
Sbjct: 504 EVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKE 563
Query: 458 TIQAKNALESYCFSMKSTMED-EKLQGK 378
I A+N LE+Y ++MK+T+ D +KL K
Sbjct: 564 RIDARNQLETYVYNMKNTVGDKDKLADK 591
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -2
Query: 382 EKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIIT 236
+K+ +K+ + + + ++WLD NQ A+KEEYE K KE+E + NPII+
Sbjct: 590 DKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEKLKEVEAVCNPIIS 638
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/87 (50%), Positives = 64/87 (73%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EVT ++D NGIL+V+A +K+ + ITITNDKGRLS+EEI+RMV EAE++ ED + +E
Sbjct: 510 EVTFEVDENGILHVTASDKAAGRSKSITITNDKGRLSQEEIDRMVREAEEFAEEDRRVRE 569
Query: 458 TIQAKNALESYCFSMKSTMEDEKLQGK 378
+ A+N LE+Y + M+S + D + GK
Sbjct: 570 RVDARNRLENYVYRMRSAVRDGGMAGK 596
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = -2
Query: 379 KISDSDKQTILDKCNDTIKWLDSN----QLADKEEYEHKQKELEGIYNPIITKM 230
KI D D++ + + ++WL+ N + A+KE+YE K KE+E + PII ++
Sbjct: 596 KIGDDDRERMESALTEALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQV 649
>08_01_0654 - 5639419-5641449
Length = 676
Score = 88.6 bits (210), Expect = 5e-18
Identities = 37/79 (46%), Positives = 62/79 (78%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EVT ++DANGIL+V A +K+T + +ITI+ D ++S+EEI+RMV EAE++ ED + +E
Sbjct: 516 EVTFEVDANGILSVLAADKATGRSEKITISGDDRKISQEEIDRMVREAEEFAEEDRRHRE 575
Query: 458 TIQAKNALESYCFSMKSTM 402
+ A+N+LE+Y +++K+T+
Sbjct: 576 QVDARNSLEAYVYNIKNTL 594
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = -2
Query: 382 EKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIIT 236
+ + +K + + + +WLD N A KEEYE K +ELE + NP+++
Sbjct: 600 DAMEGEEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMS 648
>05_04_0392 - 20889699-20891726
Length = 675
Score = 88.2 bits (209), Expect = 7e-18
Identities = 37/78 (47%), Positives = 62/78 (79%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 456
VT ++DANGIL+V A +K+T + +ITI+ D ++S+EEI+RMV EAE++ +ED + +E
Sbjct: 517 VTFEVDANGILSVLAADKATGRSEKITISGDDRKISQEEIDRMVREAEEFADEDRRHREQ 576
Query: 455 IQAKNALESYCFSMKSTM 402
+ A+N+LE+Y +++KST+
Sbjct: 577 VDARNSLEAYVYNVKSTL 594
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -2
Query: 382 EKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIIT 236
+ + +K+ + + + +WLD N A KEEYE K +ELE + NP+++
Sbjct: 600 DAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMS 648
>05_04_0052 - 17515344-17517353
Length = 669
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/86 (39%), Positives = 62/86 (72%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EV ++DA+GIL+VSA +++T + +ITI+ D + S+EEI+RM+ EAE++ +ED + +E
Sbjct: 512 EVAFEVDADGILSVSAADRATGRSERITISGDDRKTSREEIDRMLGEAEEFADEDRRHRE 571
Query: 458 TIQAKNALESYCFSMKSTMEDEKLQG 381
A+N+LE+Y + +K+ + ++ G
Sbjct: 572 RAGARNSLEAYVYGVKNAVVGGEMAG 597
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = -2
Query: 364 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIIT 236
+K+ + + +WLD NQ KEEYE K +ELE + NP+++
Sbjct: 603 EKEKVEAAVMEAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMS 645
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 80.2 bits (189), Expect = 2e-15
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -1
Query: 635 VTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 465
VT ID NGI+NVSA +K+T + N ITI +DKGRLSKEEIERMV +AEKY+ ED+++
Sbjct: 494 VTFSIDYNGIMNVSAEDKTTGRSNSITIKSDKGRLSKEEIERMVKKAEKYKAEDEEE 550
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EV DIDANGIL+VSA++K T K+ ITIT L K+E+E+MV EAEK+ ED ++++
Sbjct: 450 EVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLPKDEVEKMVEEAEKFAKEDKEKRD 508
Query: 458 TIQAKNALESYCFSMKSTMED 396
I KN ES + + +++
Sbjct: 509 AIDTKNQAESVIYQTEKQLKE 529
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = -1
Query: 668 PGAAWRCLXXEVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEK 489
P A R +VT DIDANG+LNVSA K T ++N ITITN GRL+KEEI+RM EAE+
Sbjct: 491 PPAPKRVPSIDVTFDIDANGVLNVSAEHKVTGQKNSITITNRSGRLNKEEIDRMALEAER 550
Query: 488 YRNEDDKQKETI 453
++ + KQ E +
Sbjct: 551 HKMKRIKQNEVV 562
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 72.9 bits (171), Expect = 3e-13
Identities = 36/79 (45%), Positives = 55/79 (69%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EVT DIDANGI+ VSA +K+T KE QITI G LS+ EI++MV+EAE + +D ++K
Sbjct: 498 EVTFDIDANGIVTVSAKDKATGKEQQITI-RSSGGLSEAEIQKMVHEAELHSQKDQERKA 556
Query: 458 TIQAKNALESYCFSMKSTM 402
I +N ++ +S++ ++
Sbjct: 557 LIDIRNTADTTIYSIEKSL 575
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 72.9 bits (171), Expect = 3e-13
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
EVT DIDANGI+ VSA +KST KE QITI G LS+ EI++MV EAE + +D ++K
Sbjct: 518 EVTFDIDANGIVTVSAKDKSTGKEQQITI-RSSGGLSEAEIQKMVQEAELHSQKDQERKA 576
Query: 458 TIQAKNALESYCFSMKSTM 402
I +N ++ +S++ ++
Sbjct: 577 LIDIRNNADTTIYSVEKSL 595
>11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 465
+VT DID NG+LNV+A +K T ++N I I+N GRL+KEEIERM EAE+Y+ + KQ
Sbjct: 1297 DVTFDIDGNGVLNVTAEDKDTGRKNNIIISNRSGRLNKEEIERMALEAERYKMKRIKQ 1354
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = -1
Query: 632 TXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI 453
T +IDANG+L+VSA + T ++N ITITN GRL KE++ERM EA Y + + + ++
Sbjct: 1145 TLEIDANGVLHVSAEDMGTGRKNSITITNHSGRLKKEDVERMSREARSYNRKRKRTRSSL 1204
Query: 452 Q 450
Q
Sbjct: 1205 Q 1205
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKY 486
+VT + DANG+L+VSA + T +N I ITN GRL KE++ERM EA Y
Sbjct: 509 DVTFEFDANGVLHVSAKDMGTGSKNNIAITNHSGRLKKEDVERMAREARSY 559
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = -1
Query: 647 LXXEVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDK 468
L V IDA+G+L VSA +K +NQ+ + ++ +LSKEEIERM EA++Y D+
Sbjct: 467 LSVSVCFSIDADGVLTVSARDKVNGHKNQMRVM-EQSQLSKEEIERMTMEAKEYMAADE- 524
Query: 467 QKETIQAKNALESY 426
+KE I+AKN LE +
Sbjct: 525 EKERIKAKNLLEEF 538
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 61.3 bits (142), Expect = 9e-10
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
+VT D D NG+L+V A + T +N TITN GRL KE++ERM EA Y + + +
Sbjct: 454 DVTFDFDTNGVLHVFAEDMGTGSKNNNTITNHSGRLKKEDVERMSREARSYNRKRKRTRS 513
Query: 458 TIQ 450
++Q
Sbjct: 514 SLQ 516
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 52.0 bits (119), Expect = 5e-07
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Frame = -1
Query: 656 WRCLXXEVTXDIDANGILNVSAIEKS-TNKENQITITN----DKGRLSKEEIERMVNE-A 495
WR +VT +D G ++V A +K + K +++I + + GRLSKEEI+RM+ E A
Sbjct: 503 WRWRPIQVTVKVDELGDIHVEATDKGGSGKSERLSIVSGEGHEHGRLSKEEIDRMIREVA 562
Query: 494 EKYRNEDDKQKETIQAKNALESY 426
E E+ KE + A N LE+Y
Sbjct: 563 EDLVEEERIVKERVDALNMLETY 585
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 343 KCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPI 242
K +WLD N A+KE+YE K KELE P+
Sbjct: 602 KARAASEWLDGNPAAEKEDYEEKLKELEDACGPV 635
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 35.5 bits (78), Expect = 0.050
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 533 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 396
LSKE E +D +++ T + KN LESY +SMK +E+
Sbjct: 641 LSKELYSEAKTRLEALDKKDAERRRTAELKNNLESYIYSMKEKLEE 686
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 34.7 bits (76), Expect = 0.088
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 599 VSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 420
V +K K N G L E+++ V + + +D +ET KNA+ESY +
Sbjct: 567 VEPSKKKVKKTNVPVAELVYGALGTTELQKAVEKEYEMALQDRVMEETKDKKNAVESYVY 626
Query: 419 SMKSTMEDE 393
M++ + D+
Sbjct: 627 DMRNKLYDK 635
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 626 DIDANGILNVSAIEKSTNKENQITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQ 450
++D+NG + + + + Q+ I G +S +E+ + + +D + T +
Sbjct: 513 EVDSNGEMGQQVDKSRSERLIQLPIVQSIYGAMSNQELLEAQEQESQLAYQDKLMERTKE 572
Query: 449 AKNALESYCFSMKSTMED 396
KNALESY + ++ + +
Sbjct: 573 RKNALESYVYDTRNKLSE 590
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -1
Query: 539 GRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 393
G L EE+ + + +D +ET + KNA+E+Y + M++ + D+
Sbjct: 586 GALGSEELVKASENEYEMALQDRVMEETKEKKNAVEAYVYDMRNKLYDK 634
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 218 PEESPEVCRASRAEHPEPEVPPPGLE--ALAPPSRRSIKPTFHTTLKPT 78
PE+ P+ + P+PE PP + A PP PT+ T KPT
Sbjct: 44 PEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPT 92
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = -1
Query: 638 EVTXDIDANGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 459
+++ D NG N SA +K +KE + N+K + KEE NE EK E++ +K+
Sbjct: 177 QISDDQAVNGC-NGSADKK--DKEEETEKDNEKEKEDKEEETEKDNEKEKEDKEEETKKD 233
Query: 458 TIQAKNAL 435
+ K L
Sbjct: 234 NEKEKEQL 241
>02_03_0360 + 18104948-18106159
Length = 403
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 539 GRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 411
GR +EE+E M EAE+ + E +K++E ++ + L MK
Sbjct: 167 GRGGEEEVEEMRREAERAQEELEKEREMLRLADELREERVQMK 209
>06_03_0069 + 16179765-16179936,16179982-16180256
Length = 148
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 636 GHLXHRCQRYPQRFRYREVHQQGEPDHHYQRQ 541
G L H +R+PQR + H+Q DH+ QRQ
Sbjct: 92 GDLRHGRERHPQRVGRGQGHRQVGEDHYLQRQ 123
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 266 IGRHLQSDNYEDVXRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTL 87
+ R Q E++ +S + ++ A EP+ PPP A AP RR+ + T
Sbjct: 42 VRREAQLARLEELTESLAKSVQALESALARSVEPDPPPPAAAAAAPGDRRAPQGVAVTKR 101
Query: 86 KP 81
+P
Sbjct: 102 RP 103
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 593 AIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 462
A E+ +E + ++ RL KEE ER EA++ + E +K+K
Sbjct: 438 AEERKKREEEERLRKEEEERLKKEEEERKAEEAKRRKKEREKEK 481
>11_06_0464 + 23894893-23895077,23895148-23895706
Length = 247
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -1
Query: 302 GRQGGV*AQAERIGRH-LQSDNYEDVXRVPE--ESPEVCRASRAEHP-EPEVPPPGLEAL 135
G + A A+ G H L+ D Y + +S + CR +H PPP A
Sbjct: 12 GSTSTIVAAAKPTGHHILKIDGYSRTKAMVAAGDSIDSCRFHVGDHAWRIRTPPPPPAAT 71
Query: 134 APPSRRS 114
APPSRRS
Sbjct: 72 APPSRRS 78
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -1
Query: 536 RLSKEEIERMVNEAEKYRNE-DDKQKETIQAKNALESYCFSMKSTMEDE 393
RL+ EE+ R+ E+ R+E + Q+E +QA+ ++ S+ S++ED+
Sbjct: 117 RLASEEVRRL----ERRRDEITESQRELLQAREMIDEAQRSLSSSLEDQ 161
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +3
Query: 57 GYKVVVTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHPGYI 233
GY VVTG G C+ N Q L G+ LR R+L PG+P+ + G L H ++
Sbjct: 563 GYGCVVTGMPNLGNTCYLNALL----QCLLVLGK-LRARILGPGAPSGVLGDLLHDLFV 616
>04_04_0057 + 22410167-22411330
Length = 387
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 200 VCRASRAEHPEPEVPPPGLEALAPPSRRS 114
+CRA+ + P P PPP A +P RS
Sbjct: 173 LCRANLEKPPPPPPPPPAAAAASPSPERS 201
>02_02_0503 +
11008475-11008793,11009983-11010140,11011863-11012102,
11013502-11013757,11013846-11014057,11014413-11014453,
11014531-11014567
Length = 420
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 206 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTF----HTTLKPTCNNHLVT 57
P C A+ A P P PP A A P R + P +T NN+L T
Sbjct: 21 PRCCSAAPASSPPPSPPPSPAAAAAAPRRTPLVPALFVIGDSTADVGTNNYLGT 74
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 218 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 81
P E+PE ++ PE PP +A +PP+ +S+ P +L P
Sbjct: 1087 PPETPE--KSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPP 1130
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 218 PEES--PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 81
PEES P V +AS + E +PPP +L PP+ + + P + P
Sbjct: 1100 PEESSPPSVPKAS-SPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPP 1146
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 206 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 105
P V + S + +PPP EA APP++ S P
Sbjct: 1330 PPVPQVSLPPPKQESLPPPAKEAEAPPAKESKPP 1363
>09_04_0161 -
15232074-15232139,15232299-15232406,15233417-15233506,
15233617-15233733,15234408-15234527,15234930-15236168
Length = 579
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 215 EESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 54
E +PE RA A+ P P + + P+ RS+ P +T + ++ +TS
Sbjct: 71 ECTPEPKRAQSADRRRPSTPSSRVSTPSTPASRSVTPVRNTVTEGHKSSRRITS 124
>07_03_1282 -
25447736-25447813,25448670-25448744,25449212-25449281,
25449515-25449747,25451210-25451719
Length = 321
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 200 VCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTL 87
+CR + P P PPP +APP P F T +
Sbjct: 128 LCRCPAVDEPPPAAPPP---VVAPPEADPESPNFPTNV 162
>03_06_0345 -
33281126-33281783,33281872-33282063,33282175-33282217,
33282751-33282874,33282966-33283058,33284484-33284685,
33284751-33284857,33285462-33285543,33285629-33285666,
33285751-33285837,33286324-33286434,33286554-33286904
Length = 695
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -1
Query: 206 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 51
P C SR + P P PPP E PP+ + TT K LV P
Sbjct: 42 PRACN-SRPKVPPPPPPPPRQERARPPAGAAAGEEEETTPKCRVVTPLVAEP 92
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = -2
Query: 400 RMRSSKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPI 242
+ + S EK+S + Q ++ + ++ K + Q+ D +E EHK KE+ + N +
Sbjct: 864 QQQKSSEKVSYLEAQVLVVR-SEMEKMVQKTQMLD-QELEHKNKEISELQNSL 914
>07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961
Length = 221
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 173 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVT 57
P P PPP PS R P+ H L T LVT
Sbjct: 6 PPPSAPPPSPPRAVFPSARCCLPSPHRFLPSTRRKRLVT 44
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 218 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 81
P P R R H P PPP L PP SI PT L P
Sbjct: 72 PPPPPPAPRPPRRHHRIPPPPPPLLPT-PPPPPASISPTPAPPLPP 116
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -1
Query: 218 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFH 96
PE P + PEP PP + APP +P FH
Sbjct: 184 PEYKPPTPTLTPIPTPEPSYGPPAPKPPAPPVEDEPQPFFH 224
>01_01_0284 - 2357085-2357244,2357354-2357730,2359114-2359371
Length = 264
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = -1
Query: 602 NVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQA 447
N + ++ EN + + ++ +E +R NEA++ RNEDD+++ET +A
Sbjct: 105 NSITLTRTYQGENIEVLVSMPSLVTGDEPDRE-NEADEDRNEDDQEEETQKA 155
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 200 VCRASRAEHP--EPEVPPPGLEALAPPSRRSIKPTFHTTLKP 81
V +A+ A+ P P V PP L PP+ + P TT P
Sbjct: 15 VVQAAMAQRPGMPPAVVPPSLPTTTPPAPTVVAPPLPTTPPP 56
>09_04_0247 +
16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -1
Query: 614 NGILNVSAIEKSTNKENQITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAL 435
NG+L SA + S + E + D G + + + E+E+ +D+K A +
Sbjct: 531 NGLLLDSAKQHSVSNEKENGQIKDNGDMDRARKDVNEEESEETPEDDEKGHALQSASLVM 590
Query: 434 ESYCFSMKSTMEDEK 390
+M T++D++
Sbjct: 591 NMLDATMPGTLDDDQ 605
>07_01_0927 -
7784564-7784656,7785182-7785225,7785946-7785970,
7786357-7786497,7786590-7786619,7786686-7786762,
7786816-7786855,7787055-7787122,7787782-7789864
Length = 866
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -2
Query: 529 PRKRSSV---WLMRQRSTETRMTSKRRPSRPRMHWNLTAS 419
P +R+SV W+ R+R + R RP+R W LT S
Sbjct: 45 PHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTIS 84
>06_01_1096 -
8988463-8989167,8989335-8989361,8989560-8989648,
8989830-8990039,8990877-8991047,8991595-8991777,
8991886-8991969,8992067-8992178
Length = 526
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 170 EPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 78
EP+ PP A PP ++ +KP+ L PT
Sbjct: 293 EPQTPPRPSIASIPPYQKPLKPSLRPPLIPT 323
>03_05_0153 +
21299150-21299593,21299733-21299873,21299971-21300084,
21300181-21300354,21300486-21300494
Length = 293
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 218 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRR 117
P SP R R HP P P L L SRR
Sbjct: 9 PSPSPASTRLLRGHHPPPSCSAPSLLRLTRSSRR 42
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,579,735
Number of Sequences: 37544
Number of extensions: 382442
Number of successful extensions: 2055
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2020
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -