Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_B20
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   4.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.4  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   5.8  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   5.8  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   5.8  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   5.8  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   5.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.8  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 562 WFSLLVDFSIAETLRI 609
           WFS  V+ ++AET+RI
Sbjct: 190 WFSKNVNQTVAETVRI 205


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 570 GEPDHHYQRQRSSLQ 526
           G P HH+  Q  SLQ
Sbjct: 348 GPPHHHHHHQTQSLQ 362


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 555 HYQRQRSSLQGRDRAY 508
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 555 HYQRQRSSLQGRDRAY 508
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 555 HYQRQRSSLQGRDRAY 508
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 555 HYQRQRSSLQGRDRAY 508
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 555 HYQRQRSSLQGRDRAY 508
           HY R+RS  + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 555 HYQRQRSSLQGRDRAY 508
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,393
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)