Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B17
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 85 7e-17
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 77 1e-14
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 40 0.003
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 40 0.003
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 40 0.003
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 40 0.003
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 34 0.13
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 84.6 bits (200), Expect = 7e-17
Identities = 54/163 (33%), Positives = 72/163 (44%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
TK N L GK E GIPP P G + + K
Sbjct: 451 TKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGR 510
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXDEKXKXKIFXFXXQT 422
SK++ VNEAEKY+ D+ K+ I A LE ++K T+ DEK K KI +
Sbjct: 511 LSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKK 570
Query: 421 ILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
I K K +D N A+K + H+QK+L G+ N II +YQ
Sbjct: 571 IEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDKG 606
P PQ VTF I ANGIL+VSA KST K K TIT+DKG
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKG 509
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 77.4 bits (182), Expect = 1e-14
Identities = 51/163 (31%), Positives = 70/163 (42%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
TK N L GK E GIPP P G + + K
Sbjct: 451 TKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDR 510
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXDEKXKXKIFXFXXQT 422
FSK++ VNEAEKY+ D+ K+ I A LE ++K T+ DEK K KI +
Sbjct: 511 FSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKK 570
Query: 421 ILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
I K K +D N A+K + +QK+L G+ + +YQ
Sbjct: 571 IEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDK 609
P PQ VTF I ANGIL+VSA KST K + TIT+DK
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDK 508
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDKG 606
P PQ VTF I ANGIL+VSA KST K + TI ++KG
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKG 509
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/163 (20%), Positives = 58/163 (35%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
T+ N G E GIPP P G + + K
Sbjct: 451 TRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGR 510
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXDEKXKXKIFXFXXQT 422
++ + V+EA+++ D + +E +QA LE +K + ++ K+
Sbjct: 511 LTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQAL--DEYSSKLSTEDASR 568
Query: 421 ILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
T + +D N A+K K KEL + I+ M+Q
Sbjct: 569 AKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDKG 606
P PQ VTF I ANGIL+VSA KST K + TI ++KG
Sbjct: 466 PPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKG 509
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/163 (20%), Positives = 58/163 (35%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
T+ N G E GIPP P G + + K
Sbjct: 451 TRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGR 510
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXDEKXKXKIFXFXXQT 422
++ + V+EA+++ D + +E +QA LE +K + ++ K+
Sbjct: 511 LTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQAL--DEYSSKLSTEDASR 568
Query: 421 ILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
T + +D N A+K K KEL + I+ M+Q
Sbjct: 569 AKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDKG 606
P PQ VTF I ANGIL+VSA KST + + TI ++KG
Sbjct: 466 PPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKG 509
Score = 35.9 bits (79), Expect = 0.033
Identities = 35/163 (21%), Positives = 56/163 (34%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
T+ N G E GIPP P G + + K
Sbjct: 451 TRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGR 510
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXDEKXKXKIFXFXXQT 422
S+ + VNEA+++ D ++ I + LE +K + E+ + +
Sbjct: 511 LSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQVKQAL--EEHGSLLSAEDAKR 568
Query: 421 ILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
T + ++ N ADK K KEL I I+ M+Q
Sbjct: 569 AKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 1/164 (0%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
TK N GK + G+PP P G + + +
Sbjct: 478 TKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNR 537
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXD-EKXKXKIFXFXXQ 425
S E+ +N+AEK+ D K K+ +A LE ++K + D EK K+ +
Sbjct: 538 LSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKK 597
Query: 424 TILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
TI + N A ++K+L I+ +Y+
Sbjct: 598 TIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDK 609
P PQ VTF I NGIL V+A K T K TIT+D+
Sbjct: 493 PPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQ 535
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHD 612
P PQ VTF I NGIL VSA K T K TIT+D
Sbjct: 121 PPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITND 162
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 1/164 (0%)
Frame = -2
Query: 781 TKXNKLXGKXEXXGIPPXPXGXLKXGSPLXLXPTVSSAFPLXXSXXXXXXXXXXXXTKVV 602
TK N GK + G+PP P G + + +
Sbjct: 478 TKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNR 537
Query: 601 FSKEEXXXXVNEAEKYRNGDDKPKETIQAXXALEFXWXSMKFTMXD-EKXKXKIFXFXXQ 425
S E+ +N+AEK+ D K K+ +A LE ++K + D EK K+ +
Sbjct: 538 LSPEDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKK 597
Query: 424 TILXKXXXTXKXVDXNXXADKXXYXHKQKELXGIYNXIIXXMYQ 293
TI + N A ++K+L I+ +Y+
Sbjct: 598 TIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDK 609
P PQ VTF I NGIL V+A K T K TIT+D+
Sbjct: 493 PPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQ 535
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHD 612
P PQ VTF I NGIL VSA K T K TIT+D
Sbjct: 490 PPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITND 531
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 737 PTGAXWXPQXXVTFXIXANGILSVSAXXKSTXKGXKXTITHDKG 606
P PQ VTF I ANGI++VSA + T K + I G
Sbjct: 488 PPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG 531
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,032,921
Number of Sequences: 27780
Number of extensions: 91819
Number of successful extensions: 152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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