Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B15
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0577 + 5132876-5132894,5134352-5134845,5134937-5135162,513... 46 5e-05
07_03_0649 - 20260501-20260512,20260620-20260833,20261207-202614... 43 3e-04
07_03_0644 - 20242283-20242294,20242402-20242615,20242989-202432... 43 3e-04
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 36 0.038
04_04_1697 - 35454337-35454576,35454657-35454888,35455045-354552... 35 0.067
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 34 0.12
01_01_0467 - 3446243-3446254,3446331-3446420,3446544-3446816,344... 33 0.20
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 33 0.36
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 30 1.9
12_01_0233 + 1750772-1752058 30 2.5
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 30 2.5
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 30 2.5
04_01_0031 + 381389-381841 29 3.3
02_05_0652 + 30649857-30649933,30650026-30650141,30650307-306503... 29 3.3
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 29 5.8
05_05_0331 + 24142484-24143548 29 5.8
08_01_0238 - 1988688-1988830,1988989-1989257,1989339-1989600,198... 28 7.6
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 28 7.6
>08_01_0577 +
5132876-5132894,5134352-5134845,5134937-5135162,
5135695-5135917,5136315-5136528,5136769-5136806,
5136977-5137142
Length = 459
Score = 45.6 bits (103), Expect = 5e-05
Identities = 40/193 (20%), Positives = 73/193 (37%), Gaps = 6/193 (3%)
Frame = -3
Query: 691 VKATTPLWTAGLARVLFGERVSRXXXXXXXXXXXXXXXASLTELQFDXXXXXXXXXXXXX 512
+K+ P ++ ++R L GE A++TEL F+
Sbjct: 198 IKSAEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMVGFMGAMISNLA 257
Query: 511 XXLQHLYSKRALQDSGVHHXXXXXXXXXXXLVPMAPLWLVRDAGAVLRA--QVAWNRAGP 338
++++SKR ++ V LV + P + + + A Q A GP
Sbjct: 258 FVFRNIFSKRGMKGKSVSGMNYYACLSIMSLVILTPFAIAMEGPQMWAAGWQKALAEVGP 317
Query: 337 LLL----ADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNV 170
++ A V L ++ L +SPLT+ S+++ P P+N
Sbjct: 318 NVVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVRPVNA 377
Query: 169 VGMSVAVLGVLAY 131
+G ++A+LG Y
Sbjct: 378 LGAAIAILGTFLY 390
>07_03_0649 -
20260501-20260512,20260620-20260833,20261207-20261429,
20261706-20261931,20262051-20262494
Length = 372
Score = 43.2 bits (97), Expect = 3e-04
Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 6/193 (3%)
Frame = -3
Query: 691 VKATTPLWTAGLARVLFGERVSRXXXXXXXXXXXXXXXASLTELQFDXXXXXXXXXXXXX 512
+K+ P ++ ++R GE A++TEL F+
Sbjct: 175 IKSGEPAFSVLVSRFFLGEHFPAPVYFSLLPIIGGCALAAITELNFNMIGFMGAMISNLA 234
Query: 511 XXLQHLYSKRALQDSGVHHXXXXXXXXXXXLVPMAPLWLVRDAGAVLRA--QVAWNRAGP 338
++++SK+ ++ V LV + P + V A Q A GP
Sbjct: 235 FVFRNIFSKKGMKGKSVSGMNYYACLSMLSLVILLPFAFAMEGPKVWAAGWQKAVAEIGP 294
Query: 337 LLL----ADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNV 170
+ A V L ++ L +SPLT+ S+++ P P+N
Sbjct: 295 NFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVASIIIFHTPVQPINA 354
Query: 169 VGMSVAVLGVLAY 131
+G ++A+LG Y
Sbjct: 355 LGAAIAILGTFIY 367
>07_03_0644 -
20242283-20242294,20242402-20242615,20242989-20243211,
20243488-20243713,20243833-20244276
Length = 372
Score = 43.2 bits (97), Expect = 3e-04
Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 6/193 (3%)
Frame = -3
Query: 691 VKATTPLWTAGLARVLFGERVSRXXXXXXXXXXXXXXXASLTELQFDXXXXXXXXXXXXX 512
+K+ P ++ ++R GE A++TEL F+
Sbjct: 175 IKSGEPAFSVLVSRFFLGEHFPAPVYFSLLPIIGGCALAAITELNFNMIGFMGAMISNLA 234
Query: 511 XXLQHLYSKRALQDSGVHHXXXXXXXXXXXLVPMAPLWLVRDAGAVLRA--QVAWNRAGP 338
++++SK+ ++ V LV + P + V A Q A GP
Sbjct: 235 FVFRNIFSKKGMKGKSVSGMNYYACLSMLSLVILLPFAFAMEGPKVWAAGWQKAVAEIGP 294
Query: 337 LLL----ADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNV 170
+ A V L ++ L +SPLT+ S+++ P P+N
Sbjct: 295 NFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVASIIIFHTPVQPINA 354
Query: 169 VGMSVAVLGVLAY 131
+G ++A+LG Y
Sbjct: 355 LGAAIAILGTFIY 367
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 292 AFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMSVAVLGVLAY 131
++ +L+RVSP+T+ S++ R P P+N +G VA+ GV Y
Sbjct: 342 SYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTGVALAGVFLY 395
>04_04_1697 -
35454337-35454576,35454657-35454888,35455045-35455252,
35455380-35455629,35456232-35456354
Length = 350
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = -3
Query: 337 LLLADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMS 158
+++ GVLA+ + F V+ + +T+ S ++ RNP P+N +G +
Sbjct: 237 IIIGSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISPMNAIGCA 296
Query: 157 VAVLGVLAY 131
+ ++G Y
Sbjct: 297 ITLVGCTFY 305
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 292 AFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMSVAVLGVLAY 131
++ +L+RVSP+T+ S++ R P P+N +G VA+ GV Y
Sbjct: 355 SYLILARVSPVTHSVANCVKRVVVIVASVLFFRTPISPVNALGTGVALGGVFLY 408
>01_01_0467 -
3446243-3446254,3446331-3446420,3446544-3446816,
3446898-3447066,3447579-3447646,3447890-3448074,
3448683-3448806
Length = 306
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -3
Query: 295 AAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMSVAVLGVLAY 131
+ F V+ + SP+TY V+L +P N++G+ +AV+G+++Y
Sbjct: 198 STFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSY 252
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 337 LLLADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMS 158
LLL + LA+ + F V S LT S+++ RNP ++G +
Sbjct: 245 LLLFNSCLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYT 304
Query: 157 VAVLGVLAY 131
+ V+GV+ Y
Sbjct: 305 LTVIGVILY 313
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 665 RPERSRRFHCKRDEVCSPCTVHCXL 739
R E R++H K C PC VHC L
Sbjct: 156 RQELQRKYHLKNSP-CDPCMVHCCL 179
>12_01_0233 + 1750772-1752058
Length = 428
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -3
Query: 325 DGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMSVAVL 146
+ + A+ +A F ++ + S LT S V+++ P+N+VG +A L
Sbjct: 319 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWTVIKDTVTPVNLVGYGIAFL 378
Query: 145 GVLAYD 128
GV Y+
Sbjct: 379 GVAYYN 384
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -3
Query: 325 DGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMSVAVL 146
+ + A+ +A F ++ + S LT S V+++ P+N+VG +A L
Sbjct: 279 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWTVIKDTVTPVNLVGYGIAFL 338
Query: 145 GVLAYD 128
GV Y+
Sbjct: 339 GVAYYN 344
>01_05_0309 -
20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 400 WLVRDAGAVLRAQVAWNRAGP--LLLADGVLAWLQAVAAFSVLSRVSP 263
W + + AV A VAW +G LL +GV W +A +++ + R SP
Sbjct: 131 WAITETFAV--AAVAWTGSGDGILLAGEGVAMWARAESSWKLAWRCSP 176
>04_01_0031 + 381389-381841
Length = 150
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 348 RFHATWARSTAPASRTNHNGAIGTSARPDNVASSRKWCTPESCSARFEY 494
R H +W R P RT+ G T P R+WCTP + + R E+
Sbjct: 42 RRHGSWGR--LPLPRTD--GRTRTGVPPPRTRE-RRWCTPRTSTLRREW 85
>02_05_0652 +
30649857-30649933,30650026-30650141,30650307-30650392,
30650511-30650605,30650774-30650899,30651009-30651162
Length = 217
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 375 TAPASRTNHNGAIGTSARPDNVASSR 452
T+ S T NGA+GT RP+N +SR
Sbjct: 75 TSRFSATVINGALGTKTRPENATASR 100
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 372 STAPASRTNHNGAIGTSARPDNVASSRK 455
S+AP SRT N + G + R DN++SS+K
Sbjct: 188 SSAPPSRTPSNSSDGPTTR-DNISSSKK 214
>05_05_0331 + 24142484-24143548
Length = 354
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 325 DGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVGMSVAVL 146
+ + A+ +A F ++ + S LT S V+R+ P+N+ G +A L
Sbjct: 247 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFL 306
Query: 145 GVLAYD 128
GV Y+
Sbjct: 307 GVAYYN 312
>08_01_0238 -
1988688-1988830,1988989-1989257,1989339-1989600,
1989693-1989805,1990560-1990594,1990771-1990878,
1992178-1992483
Length = 411
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 358 AWNRAGPLLLADGVLAWLQAVAAFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPP 179
+WN L + + ++ ++ F V+SR S LT S + +
Sbjct: 296 SWNFPPFTLFLNCLCTFILNMSVFLVISRTSALTARVTGVVRDWSVVLLSAAIFADTQLT 355
Query: 178 -LNVVGMSVAVLGVLAYD 128
+N++G ++A+ GV+AY+
Sbjct: 356 FINIIGYAIAIAGVVAYN 373
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 292 AFSVLSRVSPLTYXXXXXXXXXXXXXXSLVVLRNPAPPLNVVG 164
++S+L+RVSP+T+ S++ R P P+N +G
Sbjct: 323 SYSLLARVSPVTHSVANCVKRVVVIVSSVLFFRTPISPINALG 365
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,096,001
Number of Sequences: 37544
Number of extensions: 109378
Number of successful extensions: 427
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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