Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B12
(781 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0611 + 25461469-25461655,25461670-25462238 31 0.78
05_07_0302 - 29091666-29092331 31 0.78
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 31 0.78
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 31 1.0
04_01_0420 - 5561632-5563908 30 1.8
09_04_0460 - 17779111-17780184 30 2.4
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 29 3.1
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 29 3.1
02_05_0537 - 29836846-29837220 29 3.1
01_06_0660 + 30969879-30970218,30970346-30970514,30971373-309716... 29 3.1
07_01_0947 + 7982783-7983619,7983713-7983859,7983953-7984318 29 4.1
04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032... 29 4.1
03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100... 29 4.1
02_01_0692 + 5179778-5181847 29 4.1
12_01_1068 - 11052769-11052943,11053103-11053182,11053304-110534... 29 5.5
04_03_0885 + 20552538-20552871,20553162-20553178 29 5.5
03_06_0189 + 32214702-32215154 29 5.5
03_05_0850 + 28206166-28206767,28207648-28207891,28208076-282083... 29 5.5
03_03_0146 - 14835236-14835445,14835525-14835714,14836740-14837269 29 5.5
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 5.5
>11_06_0611 + 25461469-25461655,25461670-25462238
Length = 251
Score = 31.5 bits (68), Expect = 0.78
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +1
Query: 151 VAPPHKAVPXMSPRSRPASVPAGTPGSR*GTAVGLPPLPGIKTRCVSSHWNRSIPRSSCR 330
VAPP + P P PAG+ G + PPLPG + R +H N R
Sbjct: 167 VAPPRRPPPPRLPSRASPLAPAGSDG------MAPPPLPGRRRRRCYTHRNGERER-ELE 219
Query: 331 RNYPRSR 351
RN R R
Sbjct: 220 RNGERER 226
>05_07_0302 - 29091666-29092331
Length = 221
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 193 NVDSXRGPPCVGEQRDSRRQPRVLRLHNPAVAVTPFW 83
N RGP QR + ++P LR P A +PFW
Sbjct: 183 NKSKGRGPLARAPQRPNLQKPNSLRPTRPQAAASPFW 219
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 160 PHKAVPXMSPRSRPASVPAGTPGSR*GTAV-GLPPLPGIKTRCVSSHWNRSI 312
P + +P +SP RPA P G+ +AV GLP G+ + SH R +
Sbjct: 147 PLRRLPLVSPPPRPADFPPRPGGAVLDSAVRGLPRAQGVDVQPEESHIRRGV 198
>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = -1
Query: 484 DRLTWGDGKDYTSHHVSWRLISLWENNNVIFKILNTEYEMYLKLDVNVDSYGDRKTWGSN 305
D+ +WG+ S +W + + N + ++ + V+ + D+++WG+
Sbjct: 1729 DKESWGNVPASPSDS-AWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNV 1787
Query: 304 GSSEKRHTWSLYPVKVGDQQLFLIENREYR-QGLKLDANVDSXRGPPCVGEQRDSRRQPR 128
+S W+ PV GD E E R + K D RG G++ + R PR
Sbjct: 1788 PASPSDSAWNAAPVSQGDDVWNSAEANESRNKDWKSDG--WGARGGNWRGQRNNPGRPPR 1845
>04_01_0420 - 5561632-5563908
Length = 758
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 169 AVPXMSPRSRPASVPAGTPGSR*GTAVGLPPLPGIKTRCVSSH--WNRSIPRSS 324
AVP SP + + P T ++ GT++ P L GI +H W+ ++ +S+
Sbjct: 511 AVPDKSPGANATAAPTRTFSAKSGTSMSAPHLAGIAAVIKKAHPEWSPAVIKSA 564
>09_04_0460 - 17779111-17780184
Length = 357
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = -1
Query: 340 DSYGDRKTWGSNGSSEKRHTWSLYPVKVGDQQLFLIENREYRQGLKLDANVDSXRGPPCV 161
D +GD G + H W + V + + + I EYR G+ + C+
Sbjct: 107 DGFGDGDEEAGGGGGDVHHVWYIRTVGLDEATITSIATAEYRAGVGWGGDC-----AVCL 161
Query: 160 GEQRDSRRQPRVLRLHNP 107
GE RD + R +P
Sbjct: 162 GEFRDGELVRLLPRCSHP 179
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 118 AVVLGVVGDCP-VAPPHKAVPXMSPRSRPASVPAGTPGSR*GT---AVGLPPLPGIKTRC 285
AV +G V P V H+ + ++ P +P+ P + G A PPLP I T
Sbjct: 184 AVNVGNVSITPMVGRTHQPIESVASSHVPLIIPSAAPTHQMGVPSGAASAPPLPVIDTNV 243
Query: 286 VSSH 297
SSH
Sbjct: 244 HSSH 247
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 26 CCDKVYCNMVRCSGAVVWDPEGCHCHG 106
C +K+ C+ CS W C CHG
Sbjct: 522 CSEKLACSCPHCSCKNTWGSFDCSCHG 548
>02_05_0537 - 29836846-29837220
Length = 124
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 181 MSPRSRPASVPAGTPGSR*GTAVGLPPLPGIKTRCVSSHWNRSIPRSSCRRNYPRSR 351
M R+RP + AG G R T G P I +RCV + + R+ + PRSR
Sbjct: 1 MRRRARPQPLCAGM-GRRGATVKGEAHAPAISSRCVVTAGRFLLHRAPSAASPPRSR 56
>01_06_0660 +
30969879-30970218,30970346-30970514,30971373-30971635,
30971717-30971864,30972019-30972082,30972225-30972248
Length = 335
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +1
Query: 139 GDCPVAPPHKAVPXMSPRSRPASVPAGTPGSR*GTAVGLPPLPGIKTRCVSSHWNRSIP 315
G CP PP P R+RP + G VG PP+ + SS ++ P
Sbjct: 145 GCCPPPPPPHGAPATPARNRPQTQGRGAA----APVVGWPPIRSFRRNLASSSSSKHSP 199
>07_01_0947 + 7982783-7983619,7983713-7983859,7983953-7984318
Length = 449
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 78 GIQKGVTATAGL*SRSTRGCRRLSRCSPT 164
G+ G A L R RGCRRLS SPT
Sbjct: 186 GVLAGCAALDCLLLRGVRGCRRLSISSPT 214
>04_04_1676 -
35302498-35302836,35302911-35302997,35303063-35303286,
35303375-35303675,35303762-35303860,35304895-35305032,
35305108-35305326
Length = 468
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 139 GDCPVAPPHKAVPXMSPRSRPASVPAGTPGSR*GTAVGLPP 261
G C ++ P A P M+ S PA+ PA P + PP
Sbjct: 362 GSCSLSSPPAAPPKMAAASPPAAAPAPAPEMAPSSPPAEPP 402
>03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,
1008103-1008273,1008405-1008553,1008780-1008927,
1009015-1009083,1009168-1009416,1009516-1009710,
1009869-1009985,1010205-1011329
Length = 921
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = -1
Query: 529 YNQALKLDANVGEYNDRLTWGDGKDYTSHHVSWRLISLW-ENNNVIFKILNTEYEMYLKL 353
Y A L A G+ ND L + D+T + W +SLW E+ + + + +
Sbjct: 795 YTWANMLSAPRGQVNDPLITQNSTDFTVALMDWFWMSLWAEHIGAVEESFSCPESLECTR 854
Query: 352 DVNVDSYGDRKTWGSNGSSEKRHTWSLYPVKV 257
V + + + S+ SE R YPV V
Sbjct: 855 QVRHIGEQNWRQFASSEVSEMRGHLVKYPVSV 886
>02_01_0692 + 5179778-5181847
Length = 689
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 151 VAPPHKAVPXMSPRSRPASVPAGTPGSR*GTAVGL 255
+APP +A P +P A P G GS G AVG+
Sbjct: 258 LAPPAQAPPPPAPAPPRAQPPPGGSGSGKGVAVGV 292
>12_01_1068 -
11052769-11052943,11053103-11053182,11053304-11053401,
11053487-11053627,11053701-11053841,11053933-11054017,
11055296-11055826,11055926-11055940
Length = 421
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 154 APPHKAVPXMSPRSRPASVPAGTPGSR*GTAVGLPPLPGIKTR 282
APP + V S SRPA+ A P + T PPL ++TR
Sbjct: 108 APPAEDVVVSSSYSRPAAAVASAPQA--CTVSSAPPLRAVETR 148
>04_03_0885 + 20552538-20552871,20553162-20553178
Length = 116
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 139 GDCPVAPPHKAVPXMSPRSRPASVPAGTPGSR*GTAV 249
G+C PP K ++P + A P TP S TAV
Sbjct: 26 GECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAV 62
>03_06_0189 + 32214702-32215154
Length = 150
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 157 PPHKAVPXMSPRSRPASVPAGTPGSR*GTAVGLPPLPGIKT 279
PP AVP ++ PA +PA P AV LPP+P I T
Sbjct: 103 PPMPAVPAVTLPPMPAGIPA-VP------AVTLPPMPSIPT 136
>03_05_0850 +
28206166-28206767,28207648-28207891,28208076-28208389,
28209013-28209067
Length = 404
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 148 PVAPPHKAVPXMSPRSRPASVPAGTP 225
P PP + P +SP S P S+ + TP
Sbjct: 10 PSLPPSSSSPRISPHSTPVSLTSATP 35
>03_03_0146 - 14835236-14835445,14835525-14835714,14836740-14837269
Length = 309
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 139 GDCPVAPPHKAVPXMSPRSRPASVPA 216
GD P + P A P SP S A+VPA
Sbjct: 57 GDSPTSSPAPAAPWESPTSGAATVPA 82
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 148 PVAPPHKAVPXMSPRSRP--ASVPAGTPGSR*GTAVGLPP 261
PVAPP AVP P+ +P A A T S T PP
Sbjct: 207 PVAPPGAAVPPAQPQPQPPQAGAEAVTTESTEATQAANPP 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,991,987
Number of Sequences: 37544
Number of extensions: 412335
Number of successful extensions: 1563
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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