Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B10
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 149 1e-35
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 149 1e-35
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 149 1e-35
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 149 1e-35
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 114 4e-25
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 62 3e-09
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 35 0.38
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 35 0.38
BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase... 32 2.0
AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine ... 32 2.0
AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein. 32 2.0
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 4.7
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 4.7
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 4.7
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 4.7
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 4.7
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 4.7
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 4.7
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 4.7
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 4.7
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 4.7
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 149 bits (360), Expect = 1e-35
Identities = 67/74 (90%), Positives = 73/74 (98%)
Frame = -3
Query: 352 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 173
KGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKF
Sbjct: 73 KGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKF 132
Query: 172 GGPGARARYQKSYR 131
GGPGARARYQKSYR
Sbjct: 133 GGPGARARYQKSYR 146
Score = 114 bits (274), Expect = 4e-25
Identities = 50/69 (72%), Positives = 64/69 (92%)
Frame = -2
Query: 554 PIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 375
P+Q+VQVFG KKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 374 VDIRVTVQG 348
VDIRV V+G
Sbjct: 66 VDIRVRVKG 74
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 149 bits (360), Expect = 1e-35
Identities = 67/74 (90%), Positives = 73/74 (98%)
Frame = -3
Query: 352 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 173
KGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKF
Sbjct: 73 KGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKF 132
Query: 172 GGPGARARYQKSYR 131
GGPGARARYQKSYR
Sbjct: 133 GGPGARARYQKSYR 146
Score = 114 bits (274), Expect = 4e-25
Identities = 50/69 (72%), Positives = 64/69 (92%)
Frame = -2
Query: 554 PIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 375
P+Q+VQVFG KKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 374 VDIRVTVQG 348
VDIRV V+G
Sbjct: 66 VDIRVRVKG 74
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 149 bits (360), Expect = 1e-35
Identities = 67/74 (90%), Positives = 73/74 (98%)
Frame = -3
Query: 352 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 173
KGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKF
Sbjct: 73 KGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKF 132
Query: 172 GGPGARARYQKSYR 131
GGPGARARYQKSYR
Sbjct: 133 GGPGARARYQKSYR 146
Score = 114 bits (274), Expect = 4e-25
Identities = 50/69 (72%), Positives = 64/69 (92%)
Frame = -2
Query: 554 PIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 375
P+Q+VQVFG KKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 374 VDIRVTVQG 348
VDIRV V+G
Sbjct: 66 VDIRVRVKG 74
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 149 bits (360), Expect = 1e-35
Identities = 67/74 (90%), Positives = 73/74 (98%)
Frame = -3
Query: 352 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 173
KGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKF
Sbjct: 73 KGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKF 132
Query: 172 GGPGARARYQKSYR 131
GGPGARARYQKSYR
Sbjct: 133 GGPGARARYQKSYR 146
Score = 114 bits (274), Expect = 4e-25
Identities = 50/69 (72%), Positives = 64/69 (92%)
Frame = -2
Query: 554 PIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 375
P+Q+VQVFG KKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 374 VDIRVTVQG 348
VDIRV V+G
Sbjct: 66 VDIRVRVKG 74
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 114 bits (274), Expect = 4e-25
Identities = 50/69 (72%), Positives = 64/69 (92%)
Frame = -2
Query: 554 PIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 375
P+Q+VQVFG KKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 374 VDIRVTVQG 348
VDIRV V+G
Sbjct: 66 VDIRVRVKG 74
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 288 PSTRNM*TKPQRRKSKTS*YNTIGVCW 208
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 61.7 bits (143), Expect = 3e-09
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = -2
Query: 551 IQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 372
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 371 DIRVTVQG 348
DI V V+G
Sbjct: 78 DIHVRVKG 85
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -3
Query: 352 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 227
KG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 84 KGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 34.7 bits (76), Expect = 0.38
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = -3
Query: 349 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 170
GGG AQ AIR A++KAL +F + DE LL DPR E KK G
Sbjct: 334 GGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKPG 383
Query: 169 GPGARARY 146
GAR ++
Sbjct: 384 QEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 34.7 bits (76), Expect = 0.38
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = -3
Query: 349 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 170
GGG AQ AIR A++KAL +F + DE LL DPR E KK G
Sbjct: 240 GGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKPG 289
Query: 169 GPGARARY 146
GAR ++
Sbjct: 290 QEGARRKF 297
>BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase
36, fused homolog (Drosophila) protein.
Length = 1315
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 640 CTGPEFLEHCWPTGFSLSKWLLCRR--QDVSPSRPSKYSEVRKPPPQLRIASVVMECCV 470
CT P L CW + W L + +D S RPS S ++ P L + V+ CC+
Sbjct: 666 CTAPVGLPDCWDAKEQVC-WHLANQLTEDSSQLRPSLISGLQHPILCLHLLKVLYSCCL 723
>AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine
kinase protein.
Length = 1315
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 640 CTGPEFLEHCWPTGFSLSKWLLCRR--QDVSPSRPSKYSEVRKPPPQLRIASVVMECCV 470
CT P L CW + W L + +D S RPS S ++ P L + V+ CC+
Sbjct: 666 CTAPVGLPDCWDAKEQVC-WHLANQLTEDSSQLRPSLISGLQHPILCLHLLKVLYSCCL 723
>AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein.
Length = 1311
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 640 CTGPEFLEHCWPTGFSLSKWLLCRR--QDVSPSRPSKYSEVRKPPPQLRIASVVMECCV 470
CT P L CW + W L + +D S RPS S ++ P L + V+ CC+
Sbjct: 683 CTAPVGLPDCWDAKEQVC-WHLANQLTEDSSQLRPSLISGLQHPILCLHLLKVLYSCCL 740
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 331 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 200
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,457,472
Number of Sequences: 237096
Number of extensions: 2993442
Number of successful extensions: 6658
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6656
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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