Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_B10
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical pr...   127   8e-30
Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical pr...    31   0.92 
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine re...    28   8.6  

>Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical
           protein T01C3.6 protein.
          Length = 144

 Score =  127 bits (307), Expect = 8e-30
 Identities = 56/73 (76%), Positives = 66/73 (90%)
 Frame = -3

Query: 349 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 170
           GGGHVAQ+YA+RQA++KAL+A+Y KYVDE SK+E+K+I   YD+SLLVADPRR E KKFG
Sbjct: 72  GGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFG 131

Query: 169 GPGARARYQKSYR 131
           GPGARARYQKSYR
Sbjct: 132 GPGARARYQKSYR 144



 Score =  101 bits (243), Expect = 4e-22
 Identities = 43/68 (63%), Positives = 59/68 (86%)
 Frame = -2

Query: 551 IQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 372
           +Q+VQ FG KKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F  V
Sbjct: 5   VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64

Query: 371 DIRVTVQG 348
           DIR+ V G
Sbjct: 65  DIRIRVSG 72


>Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical
           protein BE10.4 protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 274 YVDEASKKEIKDILVQYDRSLLVADPRRCE 185
           + DE  +KE+ D+  QYDRS+ + D  R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 214 LLVADPRRCEPKKFGGPGARARY 146
           LL  DPR+ E  K   PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387


>AF098504-5|AAC67410.3|  322|Caenorhabditis elegans Serpentine
           receptor, class t protein62 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = +1

Query: 490 RLQYATAVAVFLPPNTWTAWMGSRLASCTAAILTEKSQ*ANSARGIPDRYSLLFCTNLFY 669
           +L   T   +F     W  W+G   +     +L   S  A + R IPD YS  + TNL Y
Sbjct: 119 QLSSPTLENLFFGGRRWMIWIGIATSFWVLFVLALASPWA-TIRYIPDWYSWDYDTNLPY 177

Query: 670 S 672
           S
Sbjct: 178 S 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,571,437
Number of Sequences: 27780
Number of extensions: 410901
Number of successful extensions: 1010
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)