Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B07
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 32 0.11
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 28 1.8
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 28 1.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.3
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 27 2.3
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 27 2.3
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 2.3
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 2.3
SPCC1223.15c |spc19||DASH complex subunit Spc19|Schizosaccharomy... 27 3.1
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 27 3.1
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 27 3.1
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 3.1
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 27 3.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 3.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.1
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 4.1
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.4
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 5.4
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 26 5.4
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 7.1
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 7.1
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 7.1
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 26 7.1
SPAC57A10.11c |tim40||TIM22 inner membrane protein import comple... 25 9.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 9.4
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 25 9.4
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 9.4
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 9.4
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 25 9.4
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.4
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 9.4
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 31.9 bits (69), Expect = 0.11
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -3
Query: 503 EAPPPLPWLRSEAKPTVESPKESIENEK---TVRVTRKRKYEEITKPVLREKGQNGRATR 333
E P P + + A PTVE+ +E+ K +V + K + E K R K + + +
Sbjct: 400 EVAKPAPVV-APAAPTVEAEVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKK 458
Query: 332 QASERKTIKAKKKET 288
+ E+K K KKK++
Sbjct: 459 EKKEKKEKKEKKKKS 473
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -2
Query: 486 PVVEKRGKADGRVTQGVDRERKNGPRHSQEEIRGDNQAGAQGEGAERTRHEASQRTQNDQ 307
PV KR + ++T+ V + + NG R S+ + A E + +++ +QN
Sbjct: 635 PVRRKRSNSITQLTEFVKQPKINGQRESR--------SAAAARKKEESGNKSQSNSQNSL 686
Query: 306 SEEKGN 289
S+E GN
Sbjct: 687 SDESGN 692
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 455 VESPKESIENEKTVRVTRKRKYEEITKPVLREKG-QNGRATRQAS 324
V+SP S +E+ RV+ R EE++K ++ G ++G+ R AS
Sbjct: 456 VQSPSRSRYSEEVQRVSEGRLSEEVSKEEEKKGGRESGQHKRMAS 500
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 566 QEEKSRRAQRPTRGNCAVAAR-EAPPPLPWLRSEAKPTVESPKESIENEK 420
++EK ++ R R + E PPP P +P + P S N+K
Sbjct: 735 EKEKEKKKDREHRKHRETEEEDEGPPPQPARPESTRPALAPPSSSHSNDK 784
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/89 (20%), Positives = 43/89 (48%)
Frame = -3
Query: 521 CAVAAREAPPPLPWLRSEAKPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGR 342
C+V +E P +++ + + +SP S ++ + ++R+ E +K K +
Sbjct: 549 CSVDGKEGVVPSNFIKPDTEGDAKSPPSSSKSGQGSSLSRRASKHE-SKHKRDSKHEARP 607
Query: 341 ATRQASERKTIKAKKKETLTLNQQEDQMR 255
++ S R++ A+K + +++ED R
Sbjct: 608 ESKHESHRESKSAEKDKKDKKDKKEDSKR 636
>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -3
Query: 491 PLPWLRSEAKPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKT 312
P W+ EA P V P ES++ + + E +L K Q A +++S T
Sbjct: 317 PSNWIALEALPLVSIPNESLDESDELAESLSDS-EAARLQLLGIKKQESVAKKKSSFPST 375
Query: 311 IKAKKKETL 285
IK + TL
Sbjct: 376 IKDQPNLTL 384
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 595 KKSKDSPVPRKRRKVDAPRGQREAIAQSRQEKHPRHS 485
+KS +S R K D P+ + I Q KH H+
Sbjct: 1106 RKSINSSDVESRSKTDGPKSMHDLIKQLHMRKHSSHT 1142
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -3
Query: 617 PFPGSASEEVQG---LPRAAQEEKSRRAQRPTRGNCAVAAREAPPPLPWLRSEAKPTVES 447
P+P + G +P+ AQ K+ Q T A +R P P+P + PT +
Sbjct: 37 PYPHVQNPAFHGSVDVPQVAQ--KAFDPQAATVSESANVSRPTPAPVPPAGNTNTPTTSN 94
Query: 446 PKESIENEKT 417
+++EN T
Sbjct: 95 SNQNLENNVT 104
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 27.5 bits (58), Expect = 2.3
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Frame = -3
Query: 488 LPWLRSEAKPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTI 309
LP LR + T P + +K V K E V + + + Q+ + KT+
Sbjct: 550 LPPLREQTSITSGVPPSN-RLKKHVSTPEKIVEERSIDEVSQSNTPSSKQLPQSVDGKTV 608
Query: 308 KAKKKETLTLNQQEDQMRMTRSRKRRLEVSLS--PSEVKSI 192
A T Q + +TR + R S S P VK I
Sbjct: 609 TANANSTTVAKQPTSNVALTRPKPVRTATSQSKIPKPVKHI 649
>SPCC1223.15c |spc19||DASH complex subunit Spc19|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 152
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 404 RKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLE 225
R+ K+EEI KP+L + Q + + +R+ K K L QE ++ M ++R
Sbjct: 59 RQAKFEEIVKPILSKAFQRLEDSISSLQRQEDSLKTKYEL----QEARLDMLKNRPATSA 114
Query: 224 VSL---SPSEVKSIV 189
S+ S ++K+I+
Sbjct: 115 FSVTTESSEQLKAII 129
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 27.1 bits (57), Expect = 3.1
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = -3
Query: 608 GSASEEVQGLPRAAQEEKSRRAQRPTRGNCAVAAREAPPPLPWLRSEAKPTVESPKESIE 429
G+ + E + A+E++ R + + + A RE + K T S +++
Sbjct: 133 GTFTSEFSEWMQKAEEDEDRVCEDASSSD--EAKREKRKKHSSKKKSKKKT--STGSALD 188
Query: 428 NEKTVRVTRKRK--YEEITKPVLREKGQNGRATRQASERKTIKAKKKETLT 282
+K ++T+K+K +++ K +K ++G + ++ ++K IK K K T
Sbjct: 189 PKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDKPEST 239
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = -3
Query: 503 EAPPPLPWLRSEAKPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGR-ATRQA 327
+A P+P +++ K + K E+ +R+ ++K EE+ + + + + + +
Sbjct: 260 QAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLRTIDKAPAISKKLQQKDK 319
Query: 326 SERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSLSPSEVKSI 192
+E+ + KA T + ++ + R LE+ L S+
Sbjct: 320 AEKFSNKAVSSSTTEIKLKKKKFGKHRLPNNPLEIKLGDELTSSL 364
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = -3
Query: 581 LPRAAQEEKSRRAQRPTRGNCAVAAREAPPPLPWLRSEAKPTVESPKESIENEKTVRVTR 402
LP+ ++++S P+ A+ APP L S +K S ES EK RVT
Sbjct: 604 LPKTPEKDRSLNVT-PSSSTPTPASVLAPPSSASL-SSSKDANRSVPESPRREKKNRVT- 660
Query: 401 KRKYEEITKPVLREKGQNGR---ATRQASER-KTIKAKKKETLTLNQQEDQMR 255
++ T + KG G+ A + +++ IK KKE + N++ + ++
Sbjct: 661 ---LDDFTFLAVLGKGNFGKVMLAEYKVNKKFYAIKVLKKEAILKNEELESLK 710
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/82 (19%), Positives = 41/82 (50%)
Frame = -3
Query: 479 LRSEAKPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAK 300
+R +A+ E + ++ R R++ EE + E + +TRQ SER + A+
Sbjct: 33 IREKAREITEERNRQRKLQRE-RELRQKYEEEQRRQQAMEAKRIAASTRQTSERPPLSAE 91
Query: 299 KKETLTLNQQEDQMRMTRSRKR 234
+ + + +++D++ ++ ++
Sbjct: 92 EAKRIREVKEKDRLESKKNERQ 113
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 338 TRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSLSPSE 204
T E I K+ T T+N+ +Q+ M +S E SLS +E
Sbjct: 1611 TEWLQEEVNIMKIKELTSTVNKYREQLAMVQSLNEHAESSLSKAE 1655
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.1
Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 3/179 (1%)
Frame = -2
Query: 747 NLEERXPXXKPGSKRPTXXXPGPKXGXLXXTXESHKGXDGNPGPLPRKCERRSPRTPPCR 568
N R P + T P + + + + P P++ ER P P
Sbjct: 457 NTLRRTPAKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQN 516
Query: 567 ARGEKSTRPEANERQLRSRGKRSTPAT-PVVEKRGKADGRVTQGVDRERKNGPRHSQEEI 391
E P+ + G S V E AD + GP +++EE
Sbjct: 517 QPAEYRDTPDTPRNIMPLPGLMSADQPIKVTEPSNDADKAIVA-------EGP-NNEEET 568
Query: 390 RGDNQAGAQGEGAERTRHEASQRTQNDQSEEK--GNFDLESTGRSDAHDEVQEATAGGQ 220
+G Q ++ S Q S NFD E+ ++AH+ V + + Q
Sbjct: 569 KGPVIPETQETSEQQVHKTPSPEKQKVLSPPPIITNFDKETLASNEAHEAVPQKPSAPQ 627
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 539 RPTRGNCAVAAREAPPPLPWLRSEAKPTVESPKE 438
R G A PPPLP + PT E PK+
Sbjct: 956 RKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKD 989
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 26.6 bits (56), Expect = 4.1
Identities = 26/129 (20%), Positives = 46/129 (35%)
Frame = -2
Query: 630 GNPGPLPRKCERRSPRTPPCRARGEKSTRPEANERQLRSRGKRSTPATPVVEKRGKADGR 451
GNP K E R + E+ + +A E + S+G ++ EKR A R
Sbjct: 2 GNPKKRAEKAEAAKSRK-----QDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALER 56
Query: 450 VTQGVDRERKNGPRHSQEEIRGDNQAGAQGEGAERTRHEASQRTQNDQSEEKGNFDLEST 271
+ E++ + +G +A + + +E Q DL S
Sbjct: 57 KAERERLEKEEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSL 116
Query: 270 GRSDAHDEV 244
S + D++
Sbjct: 117 NNSSSKDKI 125
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 5.4
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = -3
Query: 452 ESP-KESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLN 276
E+P K+S + E + + K K +PV+ K + ++ + K +K+ KKE L
Sbjct: 64 ETPSKKSQKLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENHKVKKVKSPKKEKLVGK 123
Query: 275 ---QQEDQMRMTRSRKRRLEVSLSPSEVK 198
++ED + ++K + S +PS +K
Sbjct: 124 NPAEKEDTTDVEDTQKLEQKHSTTPSSLK 152
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 5.4
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -2
Query: 645 HKGXDGNP--GPLPRKCERRSPRTPPCRARGEKSTRPEANERQLRSRGKRSTPATPVVEK 472
H+ +GN G R ER + R+ R RG R N LRS +TPATP
Sbjct: 60 HRNDEGNSENGNRDRTTERSAFRS---RYRGSLLNR---NSPSLRSLSPPATPATPRSRI 113
Query: 471 RGKADGRVTQGVDR 430
G++ DR
Sbjct: 114 EGESQTSAIPQTDR 127
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 26.2 bits (55), Expect = 5.4
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = -3
Query: 626 TQVPFPGSASEE-VQGLPRAAQEEKSRRAQRPTRGNCAVAAREAPPPLPWLRSEAKPTVE 450
TQ P + + QG +EEK Q P E P P EAK E
Sbjct: 67 TQEPIVSADDAKGAQGKGADEKEEKKETIQPPEE-----VKTEPPQPEEKEGKEAKEPEE 121
Query: 449 SPKESIE--NEKTVRVTRKRKYEEITKPV 369
PKE E E + + EEIT P+
Sbjct: 122 PPKEEAEEPQEGGEEEEEEEEEEEITDPL 150
Score = 25.4 bits (53), Expect = 9.4
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Frame = -2
Query: 540 EANE--RQLRSRGKRSTPATPVVEKRG--KADGRVTQGVDRERKNGPRHSQEEI-RGDNQ 376
EA+E ++ R + + +TP+ E + + + T N +QE I D+
Sbjct: 18 EADELIKEDRKQFEENTPSKKNFETQSPDEPSPKTTDSTGARDANLSLKTQEPIVSADDA 77
Query: 375 AGAQGEGAE--RTRHEASQ-----RTQNDQSEEKGNFDLESTGRSDAHDEVQEATAGGQ 220
GAQG+GA+ + E Q +T+ Q EEK + + +E +E GG+
Sbjct: 78 KGAQGKGADEKEEKKETIQPPEEVKTEPPQPEEKEGKEAKEP-EEPPKEEAEEPQEGGE 135
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = -1
Query: 577 PVPRKRRKVDAPRGQREAIAQSRQEKHPRHSR 482
P+P+KR+ AP+ Q++++A ++ + + R
Sbjct: 126 PIPKKRKSKPAPK-QKKSVASDDEDAYDKRHR 156
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 7.1
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = -3
Query: 560 EKSRRAQRPTRGNCAVAAREAPPPLPWLRSEAKPTVESPKESIENEKTVRVTRKRKYEEI 381
+K ++ ++ N + AA APP +P +R V++ KE E EK R ++K ++
Sbjct: 150 KKGKKGKKAQNNNESEAA--APPEIPEVR------VKTKKEK-EREKKEREKLRKKQQQA 200
Query: 380 TKPVLREKGQNGRATRQASE 321
K KG G T +SE
Sbjct: 201 KK-----KGSTGEDTLASSE 215
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 7.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = -3
Query: 473 SEAKPTVESPKESIEN------EKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKT 312
SE KP E S+++ ++ +K++ EEI + E RQ +ER+
Sbjct: 31 SEEKPQKELSDASVKSSYVDQEQQAYENWKKQEQEEINRKKEEELKSKFEKLRQKNERRR 90
Query: 311 IKAKKKETLTLNQQEDQMRMTRSR 240
K TL +++DQ+ +R
Sbjct: 91 RTQGKTLAETLAEEDDQIDANDTR 114
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -2
Query: 624 PGPLPRKCERRSPRTPPCRARGEKSTRPEANERQLRSRGKRSTPATPVVEKRGKADGRVT 445
P P ++ E SP+ P ++ K ++P+A E S R+ + R + R+
Sbjct: 178 PAPDAKEPEFSSPKPKPAKSEPVKQSKPKATETARPSSFSRNEDRVKMNRMRLRIAERLK 237
Query: 444 QGVDR 430
+ +R
Sbjct: 238 ESQNR 242
>SPAC57A10.11c |tim40||TIM22 inner membrane protein import complex
subunit Tim40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -3
Query: 401 KRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQM 258
++K T+P EKG+ AT ++ +KT K K N +Q+
Sbjct: 115 EKKMTSETQPSTDEKGRKVSATENSAPKKTDKEKSSGETAGNILREQI 162
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/66 (19%), Positives = 31/66 (46%)
Frame = -3
Query: 458 TVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTL 279
+V+S E ++NE + + +++KYE + + R++ E +K +
Sbjct: 532 SVKSENEKLKNELVLEIEKRKKYETNEAKITTVATDLSQYYRESKEYIASLYEKLDRTER 591
Query: 278 NQQEDQ 261
N +E++
Sbjct: 592 NNKENE 597
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = -3
Query: 344 RATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSLSPSEVKS 195
R + E+K +++ +KE + N + Q+ + ++ R+ SPS++KS
Sbjct: 21 RQLNEIQEKKRLRSAQKEASSENAEVIQVPRSPPQQVRVLTVSSPSKLKS 70
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -2
Query: 651 ESHKGXDGNPGPLPRKCERRSPRTPPCRARGEKSTRPEANERQLRSRGKRSTPATPV 481
ES + DG+ P P S P A KST SR + T A+P+
Sbjct: 168 ESKQTSDGHRPPSPTSITTTSTSIDPSVAFSSKSTLATTRTNAPLSRPSQPTKASPL 224
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 334 LVARPFCPFSLSTGLVISSYFLLRVTRTVFSFSIDSL 444
L+A F F L GLVI F+L + +D+L
Sbjct: 1930 LLAAHFSRFELPPGLVIDQKFILTRVHNLLGACVDTL 1966
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 25.4 bits (53), Expect = 9.4
Identities = 24/119 (20%), Positives = 49/119 (41%)
Frame = -3
Query: 596 EEVQGLPRAAQEEKSRRAQRPTRGNCAVAAREAPPPLPWLRSEAKPTVESPKESIENEKT 417
EEV+ + R + K R+ Q+ N R PP S A + + I+ + +
Sbjct: 79 EEVEKILRDEERIKKRKIQKNRAAN---LQRTLQPPKRPTPSAASEVPKKKYKKIKVDPS 135
Query: 416 VRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSR 240
R T R + + + Q + R+ + + ++K T+T Q+ ++ T ++
Sbjct: 136 ARRTSSRMHTVLMAQSTETRLQEAKPRRKYTVSASAN-RQKGTMTQQQRFEEAAKTEAQ 193
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 443 KESIENEKTVRVTRKRKYEEI 381
+E IE E T++ + ++KYEEI
Sbjct: 162 RERIEWENTIQTSSQQKYEEI 182
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/82 (23%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -3
Query: 455 VESPKESI--ENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLT 282
+++ K+S+ + +T + T K++ +E + L + +N +T++ S+ +K + E
Sbjct: 368 LKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDY--LKTEYDE--- 422
Query: 281 LNQQEDQMRMTRSRKRRLEVSL 216
E++++ SRK+ +E+SL
Sbjct: 423 ---MENELKAKLSRKKEIEISL 441
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,533,401
Number of Sequences: 5004
Number of extensions: 43245
Number of successful extensions: 267
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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