Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_B05
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0201 + 32318928-32319202,32319302-32319482,32319915-323199...    31   1.2  
04_04_1339 + 32760424-32760584,32762428-32764462                       28   8.4  

>03_06_0201 +
           32318928-32319202,32319302-32319482,32319915-32319987,
           32320083-32320262,32320908-32321005,32321433-32321530,
           32321615-32321657,32322131-32322189,32322238-32322331
          Length = 366

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 227 VK*FKFNNYSLILWCYCDTSKTSKRYV 307
           V+ F FNN   + W +CD+SK  + +V
Sbjct: 272 VQGFSFNNSDYLSWAFCDSSKPGRAHV 298


>04_04_1339 + 32760424-32760584,32762428-32764462
          Length = 731

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 416 NLLMPSFQN*IRLN-RCCSFIRIFVKKVFIQGVKG 315
           N L  SF+N I LN R   FI +FV     +GVKG
Sbjct: 359 NALNSSFENFINLNNRSPEFISLFVDDKLRKGVKG 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,330,097
Number of Sequences: 37544
Number of extensions: 255297
Number of successful extensions: 553
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)