Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B03
(967 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 149 2e-36
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 145 5e-35
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 144 7e-35
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 141 7e-34
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 62 6e-10
03_01_0034 + 318432-318825,318902-319851 62 6e-10
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 62 8e-10
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 62 8e-10
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 62 8e-10
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 62 8e-10
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 61 1e-09
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 58 8e-09
05_07_0242 + 28615573-28616304 33 0.45
01_06_1014 - 33810112-33811995 31 1.0
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 3.2
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 5.5
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 7.3
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 28 9.7
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 149 bits (362), Expect = 2e-36
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = -2
Query: 369 PPXXPGGDLAKVQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 190
P PGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 360 PSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 189 EAREDLAALEKDYEEVGMD 133
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 145 bits (351), Expect = 5e-35
Identities = 64/80 (80%), Positives = 73/80 (91%)
Frame = -2
Query: 369 PPXXPGGDLAKVQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 190
P P GDLAKVQRAVCM+SN+T++ E ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFS
Sbjct: 360 PSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFS 419
Query: 189 EAREDLAALEKDYEEVGMDS 130
EAREDLAALEKDYEEVG +S
Sbjct: 420 EAREDLAALEKDYEEVGAES 439
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 144 bits (350), Expect = 7e-35
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = -2
Query: 369 PPXXPGGDLAKVQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 190
P PGGDLAKV+RAVCM+SN TA+AE ++R+D KFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 441 PTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFS 500
Query: 189 EAREDLAALEKDYEEVGMD 133
EAREDLAALEKDYEEVG +
Sbjct: 501 EAREDLAALEKDYEEVGAE 519
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 141 bits (342), Expect = 7e-34
Identities = 63/79 (79%), Positives = 72/79 (91%)
Frame = -2
Query: 369 PPXXPGGDLAKVQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 190
P PGGDLAKVQRAVCM+SN+T++ E ++R+D KFDLMY+KRAFVHWYVGEGMEEGEFS
Sbjct: 360 PSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFS 419
Query: 189 EAREDLAALEKDYEEVGMD 133
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGSE 438
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 62.1 bits (144), Expect = 6e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 336 VQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 157
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 156 DYEE 145
+Y++
Sbjct: 421 EYQQ 424
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 62.1 bits (144), Expect = 6e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 336 VQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 157
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 156 DYEE 145
+Y++
Sbjct: 421 EYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 61.7 bits (143), Expect = 8e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 336 VQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 157
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 156 DYEE 145
+Y++
Sbjct: 421 EYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 61.7 bits (143), Expect = 8e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 336 VQRAVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 157
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 156 DYEE 145
+Y++
Sbjct: 421 EYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 61.7 bits (143), Expect = 8e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -2
Query: 327 AVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 148
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 385 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 444
Query: 147 E 145
+
Sbjct: 445 Q 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 61.7 bits (143), Expect = 8e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -2
Query: 327 AVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 148
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 147 E 145
+
Sbjct: 424 Q 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 61.3 bits (142), Expect = 1e-09
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -2
Query: 327 AVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 148
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 544 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 603
Query: 147 E 145
+
Sbjct: 604 Q 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 58.4 bits (135), Expect = 8e-09
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = -2
Query: 327 AVCMLSNTTAIAEXWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 148
A + N+T+I E + R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y+
Sbjct: 380 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQ 439
Query: 147 E 145
+
Sbjct: 440 Q 440
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.7 bits (71), Expect = 0.45
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 102 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQGE 281
L +P P R P LL P + QP PH L PP+P+ T + T + +G
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 282 P 284
P
Sbjct: 149 P 149
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 1.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 249 AKRAFVHWYVGEGMEEGEFSEAREDL 172
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 111 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 239
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 171 PGPHGLRRTLPPPYPHRRTSARKH 242
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 251
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -3
Query: 245 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLL 75
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T+ + + L
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYTRDLLHAL 409
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,103,243
Number of Sequences: 37544
Number of extensions: 323309
Number of successful extensions: 1082
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -