Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B02
(803 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4RPE2 Cluster: Chromosome 1 SCAF15008, whole genome sh... 169 9e-41
UniRef50_Q14181 Cluster: DNA polymerase subunit alpha B; n=35; C... 166 7e-40
UniRef50_UPI0000E490CF Cluster: PREDICTED: similar to polymerase... 159 6e-38
UniRef50_A7S4W9 Cluster: Predicted protein; n=1; Nematostella ve... 151 3e-35
UniRef50_Q171D3 Cluster: Putative uncharacterized protein; n=5; ... 142 9e-33
UniRef50_UPI00015B5AA0 Cluster: PREDICTED: similar to Polymerase... 141 2e-32
UniRef50_Q9VB62 Cluster: DNA polymerase subunit alpha B; n=2; So... 140 3e-32
UniRef50_Q7PQA8 Cluster: ENSANGP00000013049; n=1; Anopheles gamb... 122 8e-27
UniRef50_Q0IP63 Cluster: Os12g0242900 protein; n=4; Oryza sativa... 122 1e-26
UniRef50_O74946 Cluster: Probable DNA polymerase subunit alpha B... 104 2e-21
UniRef50_Q9FXC8 Cluster: F12A21.24; n=6; core eudicotyledons|Rep... 104 3e-21
UniRef50_UPI0000DB70A6 Cluster: PREDICTED: similar to DNA polyme... 99 6e-20
UniRef50_Q00Z03 Cluster: DNA polymerase alpha subunit B family; ... 89 1e-16
UniRef50_Q21625 Cluster: DNA polymerase subunit alpha B; n=2; Ca... 85 3e-15
UniRef50_Q54S08 Cluster: DNA polymerase alpha subunit B; n=1; Di... 83 8e-15
UniRef50_Q5CWC4 Cluster: DNA dependent DNA polymerase alpha subu... 82 2e-14
UniRef50_Q6C5E1 Cluster: Similar to tr|Q8X0K1 Neurospora crassa ... 79 2e-13
UniRef50_Q5K7S4 Cluster: Alpha DNA polymerase, putative; n=1; Fi... 77 5e-13
UniRef50_A6S864 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q0UD13 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-09
UniRef50_Q20AJ5 Cluster: DNA-directed polymerase alpha; n=1; Ict... 61 4e-08
UniRef50_A5K3C3 Cluster: DNA polymerase alpha subunit, putative;... 58 2e-07
UniRef50_Q4PBF6 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A0C4N1 Cluster: Chromosome undetermined scaffold_15, wh... 53 7e-06
UniRef50_Q6FUD5 Cluster: Candida glabrata strain CBS138 chromoso... 40 1e-05
UniRef50_Q75B71 Cluster: ADL299Cp; n=1; Eremothecium gossypii|Re... 51 3e-05
UniRef50_Q8SR32 Cluster: DNA POLYMERASE ALPHA SUBUNIT B; n=1; En... 51 4e-05
UniRef50_A1CBN6 Cluster: DNA polymerase alpha/primase associated... 51 4e-05
UniRef50_A7TSY5 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_P38121 Cluster: DNA polymerase subunit alpha B; n=2; Sa... 46 8e-04
UniRef50_Q5C0B8 Cluster: SJCHGC07999 protein; n=1; Schistosoma j... 46 0.001
UniRef50_Q4Q5A8 Cluster: Putative uncharacterized protein; n=3; ... 45 0.003
UniRef50_A7AMJ9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_A5DU01 Cluster: Putative uncharacterized protein; n=3; ... 43 0.008
UniRef50_A3LWT5 Cluster: DNA polymerase alpha-primase complex B ... 43 0.008
UniRef50_Q381U6 Cluster: Putative uncharacterized protein; n=2; ... 41 0.042
UniRef50_UPI0000DB6FE0 Cluster: PREDICTED: similar to DNA polyme... 36 0.90
UniRef50_Q5KEX9 Cluster: DNA polymerase epsilon subunit B; n=2; ... 36 0.90
>UniRef50_Q4RPE2 Cluster: Chromosome 1 SCAF15008, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF15008, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 347
Score = 169 bits (410), Expect = 9e-41
Identities = 89/247 (36%), Positives = 138/247 (55%), Gaps = 12/247 (4%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGE 616
S + + PL D++ P V I+ GPF DS+H Q ++ + ++S +
Sbjct: 102 SDSLTFDPLLDLIHVITRDGPDVCILLGPFVDSKHEQIEKAQVTETFDAIFSRCIESIVD 161
Query: 615 LSNTSPVTKIYIVSNLKDAFHVNVYPTPPY----VSRRKHPNIHFVPDPCTLTINGIHVG 448
+ ++ +++ S +D H +YP PP+ +S+ + + VPDPCTL I+ + G
Sbjct: 162 GTKSTGCQLVFVPSQ-RDVHHHCIYPQPPFALPNLSKDQSQRVTLVPDPCTLLIDNVAFG 220
Query: 447 VTSTDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCP--APVPLDXXXXXXXXXX 274
+TSTDIL H+ EEIS GTG D+ SR+ H+L+Q+++YPL P V +D
Sbjct: 221 ITSTDILFHMGAEEISCGTGSDRFSRILRHMLTQRSFYPLYPPVEDVNMDFEKFQSFGQM 280
Query: 273 XASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI------DSDNATKRI 112
+P +L+LPS RYF+KDV GC+ VNP LTKG GGT+ R+L+ D + +
Sbjct: 281 PITPDVLILPSELRYFIKDVIGCICVNPGRLTKGQVGGTYGRLLVHRSPSEDGKRVSPCL 340
Query: 111 AAQIVRI 91
AAQ+V+I
Sbjct: 341 AAQVVKI 347
>UniRef50_Q14181 Cluster: DNA polymerase subunit alpha B; n=35;
Coelomata|Rep: DNA polymerase subunit alpha B - Homo
sapiens (Human)
Length = 598
Score = 166 bits (403), Expect = 7e-40
Identities = 95/248 (38%), Positives = 140/248 (56%), Gaps = 13/248 (5%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGE 616
S + Y PL D++ N P V I+ GPF D++H Q + + + L + E
Sbjct: 352 SDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIE 411
Query: 615 LSNTSPVTKIYIVSNLKDAFHVNVYPTPPY----VSRRKHPNIHFVPDPCTLTINGIHVG 448
+ +S +++ S L+D H VYP PP+ +SR + FV +PC+L+ING+ G
Sbjct: 412 GTRSSGSHLVFVPS-LRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPCSLSINGVIFG 470
Query: 447 VTSTDILMHISQEEISLGTG-GDKLSRLASHVLSQQTYYPLCPAP--VPLDXXXXXXXXX 277
+TSTD+L H+ EEIS +G D+ SR+ H+L+Q++YYPL P + +D
Sbjct: 471 LTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDMAIDYESFYVYAQ 530
Query: 276 XXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI---DSDNATKR--- 115
+P +L++PS RYFVKDV GCV VNP LTKG GGTF R+ + +D A ++
Sbjct: 531 LPVTPDVLIIPSELRYFVKDVLGCVCVNPGRLTKGQVGGTFARLYLRRPAADGAERQSPC 590
Query: 114 IAAQIVRI 91
IA Q+VRI
Sbjct: 591 IAVQVVRI 598
>UniRef50_UPI0000E490CF Cluster: PREDICTED: similar to polymerase (DNA
directed), alpha 2 (70kD subunit); n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
polymerase (DNA directed), alpha 2 (70kD subunit) -
Strongylocentrotus purpuratus
Length = 604
Score = 159 bits (387), Expect = 6e-38
Identities = 92/249 (36%), Positives = 133/249 (53%), Gaps = 14/249 (5%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGE 616
S N + PL+D++ P I+ GPF D EH Q + G V +I+ +
Sbjct: 357 SDNLSLEPLEDLIKVIKKTRPDACILLGPFVDVEHGQIKDGSLGESYDKVFSDIVQAIVR 416
Query: 615 LSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPN-IHFVPDPCTLTINGIHVGVTS 439
+ + I+ S L+DA H +YP PPY + P +HFV +P + INGI++ TS
Sbjct: 417 KTESVGCELIFQPS-LRDAHHHFIYPQPPYSEIKNQPKRVHFVAEPEMININGINIATTS 475
Query: 438 TDILMHISQEEISLGTGG-DKLSRLASHVLSQQTYYPLCPAP--VPLDXXXXXXXXXXXA 268
TDIL H+S+EEIS G D+L RL H+L+Q +YPL PA VP+D
Sbjct: 476 TDILFHLSREEISCPPGSSDRLGRLVRHILTQHNFYPLYPASEEVPVDYEKFHQYGKMGC 535
Query: 267 SPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI----------DSDNATK 118
+PH+ V PS R+FVK++ G V +NP LT G GGT+ R+++ +++ A
Sbjct: 536 APHIFVCPSRLRFFVKEIEGAVCINPGLLTSGQVGGTYARLVVKNTGPGNDEKNANQAVN 595
Query: 117 RIAAQIVRI 91
R A +IVRI
Sbjct: 596 RTAVEIVRI 604
>UniRef50_A7S4W9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 607
Score = 151 bits (365), Expect = 3e-35
Identities = 81/230 (35%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGE 616
S + Y PL D++ + P ++I+ GPF DS+H + + + +D +
Sbjct: 359 SDSLMYEPLADLIRMVQKNKPDLLILLGPFVDSKHEKIENVDLDETFESLFKRQVDLITQ 418
Query: 615 LSNTSPVTKIYIVSNLKDAFHVNVYPTPPY---VSRRKHPNIHFVPDPCTLTINGIHVGV 445
+ T ++ S +D H V+P PP+ H NIHFV DPCTL + + +G+
Sbjct: 419 ATERQGTTVVFAPSQ-RDVHHDFVFPQPPFRKDTHAMDHKNIHFVSDPCTLLVGNVTIGL 477
Query: 444 TSTDILMHISQEEISLGTGG-DKLSRLASHVLSQQTYYPLCPA--PVPLDXXXXXXXXXX 274
TSTD+L+++ EE + G D+L RL H+L Q ++YPL P V +D
Sbjct: 478 TSTDVLLNLGSEETACPPGSSDRLGRLVKHILHQHSFYPLNPPNEEVNVDYERLSHHGTL 537
Query: 273 XASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLIDSDNA 124
SP LLVLPS+ RYF K++ G + VNP L KG GGT+ R+LI D++
Sbjct: 538 PCSPDLLVLPSDLRYFTKNILGSLCVNPGRLAKGQVGGTYARILIQPDSS 587
>UniRef50_Q171D3 Cluster: Putative uncharacterized protein; n=5; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 618
Score = 142 bits (344), Expect = 9e-33
Identities = 73/217 (33%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Frame = -3
Query: 780 YXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGELSNTS 601
Y L D++TY + P V+I+TGPF D + + + +I+ + +S+ S
Sbjct: 385 YEKLSDLLTYCKNNCPDVLILTGPFGDISNPLFGTIAETYEE--YFEKIIINI--MSSVS 440
Query: 600 PVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVTSTDILMH 421
P T++ IVS+ D + V+P+ PY PN+ F+PDPC ++ING+ +G+T+ DI+
Sbjct: 441 PNTEVLIVSHHDDLMSMFVFPSFPYTISTSFPNLRFLPDPCIISINGLEIGITTADIIKD 500
Query: 420 ISQEEISLGTGGDKLSRLASHVLSQQTYYPLCPAP--VPLDXXXXXXXXXXXASPHLLVL 247
+S+ E+S GDK+ R +++ +T+YPL P P +PLD P++++
Sbjct: 501 LSEAEVSGDPKGDKIKRAFNYMFHHKTFYPLNPPPENLPLDMDLLSTFGKLSRVPNMMIC 560
Query: 246 PSNFRYFVKDVNGCVVVNPEHLTKGTGG-GTFTRVLI 139
P + + +++DV+ CV +NP L+ T G GTF RV+I
Sbjct: 561 PGDLKCYIRDVHRCVCINPGRLSDQTSGEGTFARVVI 597
>UniRef50_UPI00015B5AA0 Cluster: PREDICTED: similar to Polymerase (DNA
directed), alpha 2 (70kD subunit); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Polymerase (DNA
directed), alpha 2 (70kD subunit) - Nasonia vitripennis
Length = 622
Score = 141 bits (341), Expect = 2e-32
Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 8/217 (3%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILD---S 625
S + Y PL +++ PH++++ GPF D H Q ++ + E D S
Sbjct: 384 SNDLDYRPLWELMDKVAEDEPHLLVLIGPFLDYNHPNFQDD----ELVVPYQEYFDRLIS 439
Query: 624 XGELSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRR--KHPNIHFVPDPCTLTINGIHV 451
+ T++ +V++ +DA H VYPTP Y + + P+IH +PDPCTL ING+ +
Sbjct: 440 RVKSYLAGKCTQVVLVASNRDAHHHPVYPTPEYSLHKSVQSPDIHVLPDPCTLDINGLRL 499
Query: 450 GVTSTDILMHISQEEISL-GTGGDKLSRLASHVLSQQTYYPLCP--APVPLDXXXXXXXX 280
G+TS D LMH+++ E++L + DKL+RL +++L+Q YYPL P + +D
Sbjct: 500 GITSIDCLMHLARSEVALTQSSPDKLTRLGNYILNQACYYPLYPPAKEINVDSELWEKYA 559
Query: 279 XXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGT 169
PH+L LPS+ R+F K +N V++NPE L+K T
Sbjct: 560 FLNEKPHVLFLPSDMRHFCKSINDSVILNPERLSKRT 596
>UniRef50_Q9VB62 Cluster: DNA polymerase subunit alpha B; n=2;
Sophophora|Rep: DNA polymerase subunit alpha B -
Drosophila melanogaster (Fruit fly)
Length = 653
Score = 140 bits (340), Expect = 3e-32
Identities = 80/246 (32%), Positives = 136/246 (55%), Gaps = 11/246 (4%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*L--VVWEILDSX 622
S + Y PL D++ Y H P V+++TGPF D++H + D ++ I++S
Sbjct: 416 STDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMVGELAETFDTFFEKMIGGIMESI 475
Query: 621 GELSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVT 442
G S+T+ + +V++ KDA ++VYPTPP RR +PN++ +PDP + ++G +GVT
Sbjct: 476 G--SHTA----VLVVTSQKDAMALSVYPTPPPALRRTYPNLYMLPDPSLVDLDGFTLGVT 529
Query: 441 STDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCP---APVPLDXXXXXXXXXXX 271
STD++ H+ E ++ G+++ R +H+ Q ++YPL P + D
Sbjct: 530 STDVVDHLLSHEFAV-NAGERMHRAINHLFHQGSFYPLYPPADEDMAYDSQLALKYAQLK 588
Query: 270 ASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI------DSDNATKRIA 109
P++L+LPS+ R+F++ VN C+V+NP + GGTF R L+ + N +A
Sbjct: 589 QLPNVLILPSDQRHFIRLVNDCLVINPGRVA-DKKGGTFARFLVAPSVPGKAANMFNSVA 647
Query: 108 AQIVRI 91
Q+ RI
Sbjct: 648 CQVQRI 653
>UniRef50_Q7PQA8 Cluster: ENSANGP00000013049; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000013049 - Anopheles gambiae
str. PEST
Length = 203
Score = 122 bits (295), Expect = 8e-27
Identities = 55/172 (31%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Frame = -3
Query: 615 LSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVTST 436
+S+ T++++VS+ D VYPTPPY + N+HF+PDPC + G+ +G+T+
Sbjct: 1 MSSIGIYTEVFVVSHHDDLVSSFVYPTPPYKVASFYKNLHFLPDPCVFNLEGVEIGITTV 60
Query: 435 DILMHISQEE-----ISLGT----GGDKLSRLASHVLSQQTYYPLCPAP--VPLDXXXXX 289
D++ H+ + E +++G+ GGDK+ R H+ Q ++YPL P P VPLD
Sbjct: 61 DVIKHLIESECTVANVTIGSAPPLGGDKIKRAYGHLFHQASFYPLNPPPEDVPLDVDMLN 120
Query: 288 XXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLIDS 133
P++++ PS +V+++NGCV +NP + + G++ R++I +
Sbjct: 121 EFGRLSRVPNIMICPSALNRYVREINGCVCINPGFVDGHSADGSYARLIIQA 172
>UniRef50_Q0IP63 Cluster: Os12g0242900 protein; n=4; Oryza
sativa|Rep: Os12g0242900 protein - Oryza sativa subsp.
japonica (Rice)
Length = 400
Score = 122 bits (293), Expect = 1e-26
Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 20/255 (7%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQR-QYDGRDI*LVVWEILDSXG 619
S N + PL+++++Y + P ++I+ GPF DS+H + ++ D + ++EIL
Sbjct: 148 SDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQ 207
Query: 618 ELSN-TSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFV---PDPCTLTINGIHV 451
+ + ++ ++ +++DA H V+P P + H + +P + N IH
Sbjct: 208 DFTQYLGHNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHF 267
Query: 450 GVTSTDILMHISQEEISL----GTGGDKLSRLASHVLSQQTYYPLCPAP--VPLDXXXXX 289
G + DIL H+S EEIS GD++ R+ +H+L QQ+YYPL P P VPLD
Sbjct: 268 GCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLAN 327
Query: 288 XXXXXXASPHLLVLPSNFRYFVK---------DVNGCVVVNPEHLTKGTGGGTFTRVLID 136
++P +L+LPS+ FVK + + +NP L KG GGGTF + +
Sbjct: 328 GALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRFICMNPGRLAKGIGGGTFVELNYN 387
Query: 135 SDNATKRIAAQIVRI 91
D T + +A ++RI
Sbjct: 388 ED--TDKTSASLIRI 400
>UniRef50_O74946 Cluster: Probable DNA polymerase subunit alpha B;
n=1; Schizosaccharomyces pombe|Rep: Probable DNA
polymerase subunit alpha B - Schizosaccharomyces pombe
(Fission yeast)
Length = 574
Score = 104 bits (250), Expect = 2e-21
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 11/226 (4%)
Frame = -3
Query: 783 AYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGELSNT 604
++ PLK M++Y N + +VI+ GPF D H + + E+ +
Sbjct: 320 SFSPLKSMISYVNKNPVDLVILCGPFLDINHILIRTGNITGTSATSLEELFKERVTPILS 379
Query: 603 SPVTKIYIVSNLKDAFHVN-VYPTPPY--VSRRKHPNIHFVPDPCTLTINGIHVGVTSTD 433
++ ++ DA + +P + V+ N P+PC +IN + GV++ D
Sbjct: 380 QLTCPCILIPHINDAASDHPAWPQDAFNRVALGLPSNFKCFPNPCMFSINDVVFGVSTND 439
Query: 432 ILMHISQEEI-SLGTGGDKLSRLASHVLSQQTYYPLCPA-------PVPLDXXXXXXXXX 277
IL+H S+EE+ L + G+ +RL SHVL Q+ +YPL P P LD
Sbjct: 440 ILLHTSREELFRLPSHGNLFARLVSHVLHQRHFYPLFPGGSLEKCNPSNLDIAHLKLGEF 499
Query: 276 XXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI 139
P +L+LPS+ RYFVK+V V +NP TKG GTF ++ I
Sbjct: 500 LNTMPDILILPSDLRYFVKNVENVVSLNPGKATKGINLGTFAKLTI 545
>UniRef50_Q9FXC8 Cluster: F12A21.24; n=6; core eudicotyledons|Rep:
F12A21.24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 803
Score = 104 bits (249), Expect = 3e-21
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQR-QYDGRDI*LVVWEILDSXG 619
S N + PL +++ Y P ++++ GPF DSEH + ++ D + E+L
Sbjct: 389 SDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQ 448
Query: 618 E-LSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVT 442
+ + ++ +V +++DA H ++P PP+ +IH +PD + + V
Sbjct: 449 DYVEFMGSEVRVVLVPSIRDANHDFIFPQPPF-------DIH-IPD----LEHQVKVSCC 496
Query: 441 STDILMHISQEEISLGTGG---DKLSRLASHVLSQQTYYPLCPAP--VPLDXXXXXXXXX 277
+ D+L +S EE+S G D++SRLASH+L Q+++YPL P P +P D
Sbjct: 497 TVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQ 556
Query: 276 XXASPHLLVLPSNFRYFVK--------DVNGCVVVNPEHLTKGTG 166
+ P +L+LPS+ RYFVK D CV VNP L KG G
Sbjct: 557 ISSIPDILLLPSDMRYFVKILSLGEEEDAAKCVCVNPGRLAKGEG 601
>UniRef50_UPI0000DB70A6 Cluster: PREDICTED: similar to DNA
polymerase 73kD CG5923-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to DNA polymerase
73kD CG5923-PA, isoform A - Apis mellifera
Length = 522
Score = 99 bits (238), Expect = 6e-20
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Frame = -3
Query: 510 HPNIHFVPDPCTLTINGIHVGVTSTDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYP 331
HP I P C + ++ +H+G+TS DIL H+ Q+E+S G D+L RLA H+LSQ T+YP
Sbjct: 383 HPEIKNYP--CIINVDNLHIGITSVDILRHLGQQEVSNTPGMDRLGRLADHILSQTTFYP 440
Query: 330 LCP--APVPLDXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGT 157
L P + + LD PH+L+LPS+ +++ K +N +V+NPE L K
Sbjct: 441 LYPPFSGLNLDTTLWTKYACFERQPHILILPSDVKHYCKLLNESLVLNPERLRKYIYAKL 500
Query: 156 FTRVLIDSDNATKRIAAQIVRI 91
+ R + + I+ +I ++
Sbjct: 501 YIRSVNNKKWDPNNISCEIAKV 522
>UniRef50_Q00Z03 Cluster: DNA polymerase alpha subunit B family; n=2;
Ostreococcus|Rep: DNA polymerase alpha subunit B family -
Ostreococcus tauri
Length = 650
Score = 89.0 bits (211), Expect = 1e-16
Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 13/232 (5%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHX---QGQ--RQYDGRDI*LVVWEIL 631
S N Y PL D++ Y P +++ GP D+E+ G ++ D+ V L
Sbjct: 393 SSNLRYEPLHDLLEYVREEKPDALVLCGPLLDAENALVKSGDLGEKFTYYDVAAKVVAKL 452
Query: 630 DSXGELSNTSPVTKIYIVSNLKDAFHVNVYPTPP-----YVSRRKHPNIHFVPDPCTLTI 466
+ EL TK+ V + +D V+P P +V+ R + V +P T I
Sbjct: 453 ED--ELRERG--TKVIFVPSARDVTLDPVFPQPAASVDEFVTDRSR--VVSVSNPGTFEI 506
Query: 465 NGIHVGVTSTDILMHISQEEISLGTGG-DKLSRLASHVLSQQTYYPLCPAPVP--LDXXX 295
NG+ D+L H+S EIS G ++L RLA HV+ Q YPL P V LD
Sbjct: 507 NGVVFSACGVDVLKHLSAREISQGHAPKERLGRLAGHVVRQAHAYPLYPPDVSTCLDARH 566
Query: 294 XXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI 139
+P +L+LPS+ + F + V VNP L +G GGT ++++
Sbjct: 567 GDALAFER-APDVLILPSDLKAFAEVCEDVVCVNPGRLARGNVGGTLAKIVV 617
>UniRef50_Q21625 Cluster: DNA polymerase subunit alpha B; n=2;
Caenorhabditis|Rep: DNA polymerase subunit alpha B -
Caenorhabditis elegans
Length = 581
Score = 84.6 bits (200), Expect = 3e-15
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Frame = -3
Query: 789 NXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGELS 610
N Y L +++ P ++++ GPF D ++ + ++ ++L E +
Sbjct: 335 NCGYEHLCELLDKVVAEKPDILMLAGPFVDKKNTFLNKPTFNITYDNLLEDLLLKVKE-T 393
Query: 609 NTSPVTKIYIVSNL-KDAFHVNVYPTPPYVSRRKHPNIH----FVPDPCTLTINGIHVGV 445
T++ I N +D V+P+ P+ RK I FV DPC I+G+ V +
Sbjct: 394 LVGTKTQVIIQPNASRDLCVPPVFPSAPFQQNRKLDKIKKELIFVADPCIFRISGVEVAM 453
Query: 444 TSTDILMHISQEEISLGTGG---DKLSRLASHVLSQQTYYPLCPAPVPLDXXXXXXXXXX 274
TS++ + +S E D+++RL+SH+L+QQ YPL P VP
Sbjct: 454 TSSEPIQALSNTEFHRSANQENIDRVARLSSHLLTQQCMYPLEPTEVPASMGDLLDVCCI 513
Query: 273 XASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGG 163
++PH++ P+ K VNG V +N L KG G
Sbjct: 514 GSTPHIVFAPTKLAPSAKCVNGSVFINSSTLAKGPTG 550
>UniRef50_Q54S08 Cluster: DNA polymerase alpha subunit B; n=1;
Dictyostelium discoideum AX4|Rep: DNA polymerase alpha
subunit B - Dictyostelium discoideum AX4
Length = 637
Score = 83.0 bits (196), Expect = 8e-15
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Frame = -3
Query: 780 YXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSX-GELSNT 604
Y PL D+ + PH++ + GPF D + ++ + E+ ++ +L++
Sbjct: 402 YTPLDDLCNVVSNKKPHILFLMGPFIDESNVHIKKYSE------TFSELFNNLMKKLNDN 455
Query: 603 SP-VTKIYIVSNLKDAFHVNVYPTPPYV-SRRKHPNIHFVPDPCTLTIN-GIHVGVTSTD 433
P TK+ IV +L D H ++P PPYV S + NI FVP+P TL IN +G+TS+D
Sbjct: 456 IPSTTKVLIVPSLNDVDHEYIFPQPPYVPSVNLNSNILFVPNPFTLIINESFTIGITSSD 515
Query: 432 ILMH-ISQEEISLGTGGDKLSRLASHVLSQQTYYPLCPAPVPLDXXXXXXXXXXXASPHL 256
I + +S+ + + + +++Q YYP+ PA P+ +P +
Sbjct: 516 IYNNLVSKAHFKNKHTPEDIFNM---IINQNNYYPMHPAQAPISMRYLQHLNFPGFTPDI 572
Query: 255 LVLPSN 238
LV+P N
Sbjct: 573 LVVPKN 578
>UniRef50_Q5CWC4 Cluster: DNA dependent DNA polymerase alpha subunit,
inactive calcineurin like phosphatase subunit; n=2;
Cryptosporidium|Rep: DNA dependent DNA polymerase alpha
subunit, inactive calcineurin like phosphatase subunit -
Cryptosporidium parvum Iowa II
Length = 621
Score = 81.8 bits (193), Expect = 2e-14
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Frame = -3
Query: 789 NXAYXPLKDMVTYXNTHXPHVVIMTGPFXD--SEHXQGQRQYDGRDI*LVVWE------I 634
N Y L +++ Y N PHV+I+ GPF D +E + +D + +E I
Sbjct: 348 NLNYDYLNEILNYANIEKPHVLILLGPFIDVRNESIKKGDLFDFGSNTFITFEDLFRRNI 407
Query: 633 LDSXGELSNTSPVTKIYIVSNLKDAFHVNVYPTP-------PYVSRRKHP---NIHFVPD 484
+S + + KIYI+ + DA H P P P S NIHF+ +
Sbjct: 408 YNSIESFARKNEKVKIYIIPSEYDAAHPFPIPQPGLKESFFPNTSNESLTFCRNIHFLSN 467
Query: 483 PCTLTINGIHVGVTSTDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCPAPVPLD 304
PC L IN I + +TS+DI+ I I+ +G + + S L Q+T YP P P++
Sbjct: 468 PCELYINDIKISITSSDIVTPIINSCIT-RSGNLPIEVVLSQFLYQRTLYPCFPVQHPIN 526
Query: 303 XXXXXXXXXXXASPHLLVLP-SNFRYFVKDVNGCVVVNP 190
PH+++ P + FVK V G + VNP
Sbjct: 527 PKLLQKLALSGELPHIIITPYGSSCPFVKSVLGRIFVNP 565
>UniRef50_Q6C5E1 Cluster: Similar to tr|Q8X0K1 Neurospora crassa
Related to POL12; n=1; Yarrowia lipolytica|Rep: Similar
to tr|Q8X0K1 Neurospora crassa Related to POL12 -
Yarrowia lipolytica (Candida lipolytica)
Length = 608
Score = 78.6 bits (185), Expect = 2e-13
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Frame = -3
Query: 780 YXPLKDMVTYXNTHXPHVVIMTGPFXDSEHX---QGQRQYDGRDI*LVVWEILDSXGELS 610
+ PLKD++ I+ GPF DS H QG G+ + V L
Sbjct: 357 FLPLKDLLA----QPADTFILLGPFIDSVHPLVAQGSFSVPGKMVATVEDLFRHKIAPLL 412
Query: 609 NTSPVTKIYIVSNLKDAFHVNV-YPTPPYVSRRKH--PNIHFVPDPCTLTINGIHVGVTS 439
N P +I ++ + +D+ ++ +P P + + N+ +P +IN + G +
Sbjct: 413 NACPA-QIILIPSTRDSVSAHLAFPQPALARKALNLGKNVICRTNPAQFSINELMFGTAN 471
Query: 438 TDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCPAPVP----------------L 307
DI+ ++Q E++ G+ D +SR +V+ Q++ YPL P P L
Sbjct: 472 LDIVRAVAQSELNKGSQEDFMSRAGRYVVEQRSLYPLLPGPQAKQPGVAEENQTLTYHHL 531
Query: 306 DXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTF 154
D SP ++++PS + FV+ VN V++NP +LT+ GG++
Sbjct: 532 DKAYLGLCDFVDVSPDIIIMPSQVQAFVRVVNSIVIINPGYLTRMDSGGSY 582
>UniRef50_Q5K7S4 Cluster: Alpha DNA polymerase, putative; n=1;
Filobasidiella neoformans|Rep: Alpha DNA polymerase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 737
Score = 77.0 bits (181), Expect = 5e-13
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 25/242 (10%)
Frame = -3
Query: 789 NXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQR-QYDGRDI*LVVWEILDSXGEL 613
N + P + +V P V+I+ GPF DS+H + + +I ++
Sbjct: 463 NLLFEPFETLVDKVLEDRPDVLILLGPFVDSQHPIIKSCAVTETPQEIFRKQISSRLQKV 522
Query: 612 SNTSPVTKIYIVSNLKDAF-HVNVYPTP----PYVSRRKHPNIHFVPDPCTLTINGIHVG 448
SP T I ++ +++D H +P Y+ K + +P+PCT ++N + +
Sbjct: 523 VTQSPSTVIILIPSVRDVVSHHMAFPQSMLEKEYLGLPK--KVKALPNPCTFSVNEVTIS 580
Query: 447 VTSTDILMHISQEEISL---------GTGG----DKLSRLASHVLSQQTYYPLCP----- 322
++S DIL H+ Q + G G D L+ VL Q+++YPL P
Sbjct: 581 LSSVDILFHLGQAHAPIRAQEADADPGMSGSPAPDPLANHIRQVLGQRSFYPLFPPQEDV 640
Query: 321 -APVPLDXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRV 145
V LD +P +L+LPS FVK V+ +V+NP H+ + G + +V
Sbjct: 641 AGEVNLDVTHYPLLKMDQ-APDILILPSRLNKFVKIVDSTLVINPSHIARARATGHYAKV 699
Query: 144 LI 139
+I
Sbjct: 700 II 701
>UniRef50_A6S864 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 726
Score = 71.3 bits (167), Expect = 3e-11
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Frame = -3
Query: 789 NXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQ-GQRQYDGRDI*LV---------VW 640
N + PL + + V+I+TGPF D +H +D + L ++
Sbjct: 389 NLDFEPLHAICSQAADTYADVLILTGPFLDIDHPLIASGDFDLPEEALADPDTATMSAIF 448
Query: 639 E--ILDSXGELSNTSPVTKIYIVSNLKDAFHVNV-YPTPPYVSRRKH-PN-IHFVPDPCT 475
+ I + +L++T P I IV ++KDA + +P P+ + P + + +P T
Sbjct: 449 KHLITPAFTQLASTHPRITILIVPSVKDAIDKHAAWPQEPFPRKDVGLPKAVRVIGNPMT 508
Query: 474 LTINGIHVGVTSTDILMHISQEEISLGTGGDK--LSRLASHVLSQQTYYPLCP------- 322
+ +N I +G++S DIL + EEI G D L+RL +++ Q+ ++PL P
Sbjct: 509 IALNEIVMGISSQDILYELRHEEIIGGKPQDPTLLARLPKYLIEQRHFFPLFPPVQRTQL 568
Query: 321 --------APV--PLDXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKG 172
PV LD P +LV+PS+ F K V +V+NP +L+K
Sbjct: 569 PKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVVPSSLPPFAKVVESVLVINPGYLSKR 628
Query: 171 TGGGTFTRVLIDSDNATKRIAAQIVRI*CKSI-PLCLTN*PS 49
G GT+ ++ + + T++ Q I K + + +T+ PS
Sbjct: 629 RGAGTYAKLTVYPASMTQQERTQGTMIGHKLVRKVSITHHPS 670
>UniRef50_Q0UD13 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 688
Score = 46.8 bits (106), Expect(2) = 2e-09
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Frame = -3
Query: 789 NXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQR-QYD---------GRDI*LVVW 640
N + PL + +I+ GPF D+EH Q + +D L
Sbjct: 385 NLDFAPLHTFLDNAAEAYADSIILVGPFLDAEHPQIRTGDFDPPPNSSPDQATMTDLFRH 444
Query: 639 EILDSXGELSNTSPVTKIYIVSNLKDAFHVNV-YPTPPYVSRR-----KHPNIHFVPDPC 478
I + S P + +V +L+DA H + +P ++ + + V +P
Sbjct: 445 HISTALQAFSKRVPTCNVILVPSLRDAHHHHAAFPQDKFIKKELGLGAAGKMVQCVTNPM 504
Query: 477 TLTINGIHVGVTSTDILMHISQEEI--SLGTGGDKLSRLASHVLSQQTYYPLCP 322
TL++N + VG++S DIL + +EE+ G + R A +V+ Q+++ PL P
Sbjct: 505 TLSMNEMTVGMSSIDILDMLRREELVSEKSRGINIYERCARNVIEQRSFLPLFP 558
Score = 38.3 bits (85), Expect(2) = 2e-09
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -3
Query: 333 PLCPAPVPLDXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTF 154
P P LD P +L+ PS + VK V +V+NP L K GT+
Sbjct: 593 PFLPLGTMLDTSYLKLGEMLNVRPDILITPSVLQGTVKVVESVIVINPGTLAKRRAAGTY 652
Query: 153 TRVLI 139
RV++
Sbjct: 653 ARVIV 657
>UniRef50_Q20AJ5 Cluster: DNA-directed polymerase alpha; n=1;
Ictalurus punctatus|Rep: DNA-directed polymerase alpha -
Ictalurus punctatus (Channel catfish)
Length = 123
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -3
Query: 267 SPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLIDSD 130
+P +L++PS RYF+KDV GCV +NP LTKG GGT+ R+LI +
Sbjct: 66 TPDILLVPSELRYFIKDVIGCVCINPARLTKGQVGGTYGRLLIQQN 111
>UniRef50_A5K3C3 Cluster: DNA polymerase alpha subunit, putative;
n=6; Plasmodium|Rep: DNA polymerase alpha subunit,
putative - Plasmodium vivax
Length = 547
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Frame = -3
Query: 771 LKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGELSNTSPV- 595
L + + N PHVV++ GPF + Q G DI ++ I +L+ + P+
Sbjct: 300 LDNFLKIVNEKLPHVVLIFGPFLYIRNFSETIQKIG-DINVIYENIFKKIIKLAKSEPLE 358
Query: 594 -TKIYIVSNLKDAFHVNVYPTPPYVSRRKH---PNIHFVPDPCTLTINGIHVGVTSTDIL 427
T +I+ ++ D+ +V P PP+ N+HF+ +P + IN + + +TS D++
Sbjct: 359 KTHFFIIPSIYDSVNVYPLPQPPFSYENNFANLANVHFLSNPSYIYINELKIALTSCDVI 418
Query: 426 MHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCPA 319
++S + + K L +L Q +++P P+
Sbjct: 419 YNLS-KNLLCRPSEMKAFYLFEQILRQLSFFPSYPS 453
>UniRef50_Q4PBF6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 764
Score = 58.4 bits (135), Expect = 2e-07
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Frame = -3
Query: 735 PHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGELSNTSPVTKIYIVSNLKDAF 556
P +++ GPF S+H D L + EL P T + ++ + D
Sbjct: 507 PDTLVLCGPFISSKHAHLAFSTD-TPAELFIEHFTRRLNELVTRYPATTVVMIPSTDDIL 565
Query: 555 HVN-VYPTPPY-----VSRRKHPNIHFVPDPCTLTINGIHVGVTSTDILMHISQEEI--- 403
+V+ YP P + VS R + +P+P L +N + +GVTS D+L I EE+
Sbjct: 566 NVHSAYPQPGFSKDDAVSLRLPKQVKCLPNPSVLFVNELVLGVTSVDVLADIKSEEMVTR 625
Query: 402 -----------------SLGTGGDKL-SRLASHVLSQQTYYPLCPAP----VPLDXXXXX 289
S+ + + +R + +LSQ+++YPL P P + D
Sbjct: 626 IQASPNATASAASAVTQSVASKNKETNTRWSRSLLSQRSFYPLFPPPTQSGLSYDTCHSH 685
Query: 288 XXXXXXASPHLLVLPS-NFRYFVKDVNGCVVVNPEHLTKGT 169
+P LL+LPS F++ VN VV P + T
Sbjct: 686 LLGFPAVTPDLLILPSQKANPFIRVVNSATVVQPGSVAHST 726
>UniRef50_A0C4N1 Cluster: Chromosome undetermined scaffold_15, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_15,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 481
Score = 53.2 bits (122), Expect = 7e-06
Identities = 31/146 (21%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Frame = -3
Query: 600 PVTKIYIVSNLKDAFHVNVYPTPPY---VSRRKHP----NIHFVPDPCTLTINGIHVGVT 442
P ++ +V++ K+ + P PP V ++K N+ FV +PC L + + +G+
Sbjct: 304 PRVQVIVVNSTKEITSFHPVPQPPINIKVEQQKKKVQVDNLMFVGNPCILQVEDMTIGII 363
Query: 441 STDILMHISQEEISLGTGG-DKLSRLASHVLSQQTYYPLCPAPVPLDXXXXXXXXXXXAS 265
+ +++ I+ +G +K+ ++ Q+++ P+ P P D
Sbjct: 364 NEEVVSEINSASEKIGVQKLNKIEAALKQIIEQRSFVPINPTKFPCD-LTKQEFLDFDQC 422
Query: 264 PHLLVLPSNFRYFVKDVNGCVVVNPE 187
P +++ PS+F K ++ V +NP+
Sbjct: 423 PDVIITPSHFTQSAKLIDQTVFINPQ 448
>UniRef50_Q6FUD5 Cluster: Candida glabrata strain CBS138 chromosome
F complete sequence; n=2; Saccharomycetales|Rep: Candida
glabrata strain CBS138 chromosome F complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 661
Score = 39.9 bits (89), Expect(2) = 1e-05
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -3
Query: 504 NIHFVPDPCTLTINGIHVGVTSTDILMHISQEEISLGTGG---DKLSRLASHVLSQQTYY 334
N P+P T +N + VG ++ DI + +EI+ G ++ R++ HVL Q+ YY
Sbjct: 481 NFKCFPNPSTFQLNEVFVGCSNVDI--YKDMKEITKGGSTSMRNRFDRVSEHVLQQRRYY 538
Query: 333 PLCP 322
P+ P
Sbjct: 539 PVFP 542
Score = 32.3 bits (70), Expect(2) = 1e-05
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 267 SPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTG-GGTFTRVLID 136
+P ++V+PS ++F + V V +NP G GTF ++ ++
Sbjct: 583 APDIIVIPSELQHFARVVRNVVFINPGRFVLAKGVNGTFVQLTVN 627
>UniRef50_Q75B71 Cluster: ADL299Cp; n=1; Eremothecium gossypii|Rep:
ADL299Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 645
Score = 51.2 bits (117), Expect = 3e-05
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 31/252 (12%)
Frame = -3
Query: 795 SXNXAYXPLKDMVTYXNTHX-PHVVIMTGPFXDSEHX---QGQ------RQYDGRDI*LV 646
S + + L++ + N H PHV+IM GPF D H GQ + R + +
Sbjct: 363 STSIDFNHLEEFILRVNEHIRPHVLIMFGPFLDVTHPLVETGQIPTFPNLKSQPRTLDEL 422
Query: 645 VWEILDSXGELSNTSPVTKIYIVSNLKDAFHVNV-YPTPPYVSRRKH--PNIHFVPDPCT 475
+IL L +P ++ ++ +++DA + YP + + N +P T
Sbjct: 423 FTKILCPI--LRKINPRIQVVLIPSMRDAISRHTSYPQDSFSRKELQLPKNFKCWANPAT 480
Query: 474 LTINGIHVGVTSTDILMHISQEEIS-LGTGGDKLSRLASHVLSQQTYYPLCPAPV---PL 307
+N + G ++ DI + + + +++ R++ H+L Q+ +YP P +
Sbjct: 481 FRVNELFFGCSNNDIFKDMKEVPNGPINLSKNRIDRVSEHILEQRRFYPAFPGGAKTRTI 540
Query: 306 DXXXXXXXXXXXASPHL-------------LVLPSNFRYFVKDVNGCVVVNPEHLTKGTG 166
D P+L +++PS ++F + V +V+NP + G
Sbjct: 541 DDSKEHVSGADLEVPYLGLTEFIGGFIPDIVIIPSELKHFARVVKNVMVINPGAFVRARG 600
Query: 165 G-GTFTRVLIDS 133
GT+ ++ I +
Sbjct: 601 SRGTYAQLSISA 612
>UniRef50_Q8SR32 Cluster: DNA POLYMERASE ALPHA SUBUNIT B; n=1;
Encephalitozoon cuniculi|Rep: DNA POLYMERASE ALPHA
SUBUNIT B - Encephalitozoon cuniculi
Length = 418
Score = 50.8 bits (116), Expect = 4e-05
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Frame = -3
Query: 594 TKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVTSTDILMHIS 415
+K +V + D +NV+P P + I +PC +N I V ++S D + IS
Sbjct: 233 SKAVLVPSTNDMTCLNVFPQGPIGVNDER--IVCTGNPCEFFVNEILVAISSLDTPLEIS 290
Query: 414 QEEI--------------SLGTGGDKLSRLASHVLSQQTYYPLCPAPVPLDXXXXXXXXX 277
EE L GGD+L R++ H++ Q+T+ P+ P+ + +
Sbjct: 291 SEECFHDSGMECSDDACGKLLFGGDRLGRISYHLIFQRTFLPVFPS-MNVVSYSVPESMS 349
Query: 276 XXASPHLLVLPSNFRYFVKDVNGCVVVN 193
+P + ++ S ++F +DV +VVN
Sbjct: 350 MDTAPDIYIVASKLKHFCRDVGPSIVVN 377
>UniRef50_A1CBN6 Cluster: DNA polymerase alpha/primase associated
subunit; n=20; Pezizomycotina|Rep: DNA polymerase
alpha/primase associated subunit - Aspergillus clavatus
Length = 668
Score = 50.8 bits (116), Expect = 4e-05
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Frame = -3
Query: 618 ELSNTSPVTKIYIVSNLKDAFHVNV-YPTP--PYVSRRKHPNIHFVPDPCTLTINGIHVG 448
+L+ P I ++ +++DA +V +P P + V +P TL+ N +G
Sbjct: 454 KLAAAVPSITIVMIPSVRDALSKHVSWPQERLPKKELGLPKQVRMVSNPVTLSFNETVIG 513
Query: 447 VTSTDILMHISQEEISLG--TGGDKLSRLASHVLSQQTYYPLCPA------PVP------ 310
+ S D+L + +EE+ G G+ L+RL +++ Q+ + PL P+ P P
Sbjct: 514 MCSYDVLYDLRREEVLHGRPKEGNLLTRLPKYLIEQRHFMPLFPSTARENLPRPGTENGT 573
Query: 309 -----LDXXXXXXXXXXXASPHLLVLPSNFRYFVK---DVNGCVVVNPEHLTKGTGGGTF 154
LD P +L+ PS FVK V+ +V+NP L+K GT+
Sbjct: 574 ATGAMLDVSYFKLGEWWNVRPDVLITPSLLPPFVKLNQVVDSVLVINPGTLSKRRAAGTY 633
Query: 153 TRVLI 139
T++ I
Sbjct: 634 TQMAI 638
>UniRef50_A7TSY5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 670
Score = 47.2 bits (107), Expect = 5e-04
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Frame = -3
Query: 504 NIHFVPDPCTLTINGIHVGVTSTDILMHISQEEISLGTG-GDKLSRLASHVLSQQTYYPL 328
N +P T +N + G ++ D+ + + T ++ R++ H+L Q+ YYP+
Sbjct: 492 NFKCFTNPSTFQLNEVFFGCSNVDLFKDMKEITKGGNTSMRNRFDRVSEHMLQQRRYYPV 551
Query: 327 CPAPVP-------------------LDXXXXXXXXXXXA-SPHLLVLPSNFRYFVKDVNG 208
P + LD +P ++++PS +YF + +
Sbjct: 552 LPGGIKKQPITENGKKRYVHISGADLDVPYLGLTEFIGGFAPDVIIVPSELQYFARVIQN 611
Query: 207 CVVVNPEHLTKGTGG-GTFTRVLIDSDN 127
VV+NP + GG GTF ++ I+S N
Sbjct: 612 VVVINPGRFVRPNGGRGTFIQMTIESPN 639
>UniRef50_P38121 Cluster: DNA polymerase subunit alpha B; n=2;
Saccharomyces cerevisiae|Rep: DNA polymerase subunit
alpha B - Saccharomyces cerevisiae (Baker's yeast)
Length = 705
Score = 46.4 bits (105), Expect = 8e-04
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Frame = -3
Query: 747 NTHXPHVVIMTGPFXDSEHX---QGQR----QYDGRDI*LVVWEILDSXGELSNTSPVTK 589
N PHV+IM GPF D H G+ Q+ + L + L SP +
Sbjct: 422 NEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQ 481
Query: 588 IYIVSNLKDAFHVNV-YPTPPYVSRRKH-PNIHF--VPDPCTLTINGIHVGVTSTDILMH 421
++ + KDA + YP + + P +F + +P + IN I+ G ++ D
Sbjct: 482 TVLIPSTKDAISNHAAYPQASLIRKALQLPKRNFKCMANPSSFQINEIYFGCSNVDTFKD 541
Query: 420 ISQEEISLGTGGDK--LSRLASHVLSQQTYYPLCPAPV 313
+ +E I GT + L R++ H+L Q+ YYP+ P +
Sbjct: 542 L-KEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSI 578
Score = 36.3 bits (80), Expect = 0.90
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 267 SPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGG-GTFTRVLI 139
SP ++++PS ++F + V VV+NP + TG G++ ++ +
Sbjct: 627 SPDIMIIPSELQHFARVVQNVVVINPGRFIRATGNRGSYAQITV 670
>UniRef50_Q5C0B8 Cluster: SJCHGC07999 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07999 protein - Schistosoma
japonicum (Blood fluke)
Length = 213
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = -3
Query: 735 PHVVIMTGPFXDSEHXQGQRQYDGRDI*LVVWEILDSXGELSNTSPVTKIYIVSNLKDAF 556
PHV+I+ GPF DSEH G + Y + ++S E + + K+ IVS+ ++
Sbjct: 147 PHVLILLGPFVDSEH-PGIQSYSETTYEELFQSRVNSVSEWCSHLSI-KLIIVSSWREVH 204
Query: 555 HVNVYPTPP 529
H VYPTPP
Sbjct: 205 HDPVYPTPP 213
>UniRef50_Q4Q5A8 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 726
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = -3
Query: 600 PVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVTSTDILMH 421
P K+ +VS+ D + V PT Y +I +PC L++NG+H+ V + D++
Sbjct: 417 PHMKVLLVSHRGDVTQIPVLPTTMYAIADTD-DILIRSNPCRLSVNGVHISVCNEDVVGD 475
Query: 420 ISQEEIS-LGTGGDKLSRLASHVLSQQTYYPLCPAPV 313
+ + T L R+ +++ + Y PL PV
Sbjct: 476 MRDRMVERWPTADGSLRRVVEALVNGRLYVPLYSLPV 512
>UniRef50_A7AMJ9 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 561
Score = 43.6 bits (98), Expect = 0.006
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Frame = -3
Query: 735 PHVVIMTGPFXDSEHXQGQRQYDGR--DI*LVVWEILDSXGELS--NTSPVTKIYIVSNL 568
PH+V + GPF + R DI + L+ N T+ ++V +
Sbjct: 315 PHIVFIMGPFVSVRQMAADGEGLSRIGDIVYIYKRFFHEIAILAEVNQLKATRFFVVPHC 374
Query: 567 KDAFHVNVYPTPPYVSRRK------HP-NIHFVPDPCTLTINGIHVGVTSTDILMHISQE 409
D P PP + +P N+ F+ +P + +NGI + VTS D + I+
Sbjct: 375 YDVLSGFPLPQPPLDAAGSLFNDIDYPENVSFLSNPAYVRVNGILIAVTSCDPISGIANN 434
Query: 408 EISLGTGGDKLSRLASHVLSQQTYYPLCPA 319
+ + + R+ +L Q+++YP PA
Sbjct: 435 MVCI-PNEHRTRRVCEQLLLQRSFYPGYPA 463
>UniRef50_A5DU01 Cluster: Putative uncharacterized protein; n=3;
Saccharomycetales|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 673
Score = 43.2 bits (97), Expect = 0.008
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Frame = -3
Query: 747 NTHXPHVVIMTGPFXDSEHXQGQRQ--YDG--RDI*LVVWEILDSX---GELSNTSPVTK 589
N P+V+I+ GPF D + + DG +D+ E + S L +P T+
Sbjct: 374 NDIRPNVIILNGPFLDLTNKAVEEGDFSDGLLKDLQPRNLEEVFSLLVTPILKKINPETQ 433
Query: 588 IYIVSNLKDAFHVNV-YPTPPYVSRRKH--PNIHFVPDPCTLTINGIHVGVTSTDILMHI 418
+ ++ +L+D+ + YP + ++ +I P+P + +N I VG ++ D+ +
Sbjct: 434 VILIPSLRDSCVSHCSYPQDAFDRKKLQLPKHIKVFPNPSSFAVNEILVGSSNLDVFKDL 493
Query: 417 ----SQEEISLGTGGDKLSRLASHVLSQQTYYPLCPAPV 313
+ + ++ ++ R+ +H+ Q+ YYP+ P +
Sbjct: 494 RDVYKETKENVDISSNRFERIINHIFDQKRYYPVMPGSI 532
>UniRef50_A3LWT5 Cluster: DNA polymerase alpha-primase complex B
subunit; n=4; Saccharomycetaceae|Rep: DNA polymerase
alpha-primase complex B subunit - Pichia stipitis
(Yeast)
Length = 685
Score = 43.2 bits (97), Expect = 0.008
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Frame = -3
Query: 747 NTHXPHVVIMTGPFXD---SEHXQGQRQY-DGRDI*LVVWEILDSXGE--LSNTSPVTKI 586
N+ PHVV++ GPF D S G + D + + E+ L ++
Sbjct: 397 NSMKPHVVVLNGPFIDITNSMVASGDIEIPDDKSPPRNLDELFKKLISPILRKIDSRIQV 456
Query: 585 YIVSNLKD-AFHVNVYPTPPYVSRRKH---PNIHFVPDPCTLTINGIHVGVTSTDI---L 427
++ ++ D A YP + R+K N+ VP+P ++++N + + ++ D+ L
Sbjct: 457 ILIPSVNDTAIKHCSYPQDSF-ERKKFGLPKNVRIVPNPSSVSVNEVLIANSNLDVFKDL 515
Query: 426 MHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCPAPV 313
+ QE + ++ R+A+H+ Q+ +YP+ P +
Sbjct: 516 KDVHQENPEGKSFSNRFERIANHIFEQRRFYPVFPGSI 553
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -3
Query: 264 PHLLVLPSNFRYFVKDVNGCVVVNPEHLTK 175
P +L+ PS+ + FVK ++G VV+NP + K
Sbjct: 601 PDILISPSDLKSFVKVISGVVVINPGYYIK 630
>UniRef50_Q381U6 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 648
Score = 40.7 bits (91), Expect = 0.042
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -3
Query: 591 KIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVTSTDILMHISQ 412
K+ +V + D + P Y S +I +PC + +NGIH+GV + D++ + +
Sbjct: 375 KVVLVPHRDDVTQIPAIPITMY-SLESTDSIWVRSNPCRIAVNGIHIGVCNDDVVGDMRE 433
Query: 411 EEIS-LGTGGDKLSRLASHVLSQQTYYPLCPAP 316
+ + T L R+ ++ + Y PL P
Sbjct: 434 KMVERWPTESGSLRRVVEALVQSRLYAPLYEFP 466
>UniRef50_UPI0000DB6FE0 Cluster: PREDICTED: similar to DNA
polymerase epsilon subunit 2; n=1; Apis mellifera|Rep:
PREDICTED: similar to DNA polymerase epsilon subunit 2 -
Apis mellifera
Length = 454
Score = 36.3 bits (80), Expect = 0.90
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = -3
Query: 540 PTPPYVS---RRKHPNIHFVPDPCTLTINGIHVGVTSTDILMHISQEEISLGTGGDKLSR 370
P P +++ R+ P F +PC + + V DIL + + + + G+
Sbjct: 304 PLPKHLTEDFRKNIPGAIFTTNPCRIQYCTKEIVVLREDILTKMCRNALHFPSQGNIYDH 363
Query: 369 LASHVLSQQTYYPLCPAPVPLDXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNP 190
A ++ Q PL + +P+ +P L+V F + + + C V+NP
Sbjct: 364 YAKSIICQSHLSPLSLSIIPI-YWKYNHSLQIYPTPDLIVAADRFAEYETNYSNCHVINP 422
>UniRef50_Q5KEX9 Cluster: DNA polymerase epsilon subunit B; n=2;
Filobasidiella neoformans|Rep: DNA polymerase epsilon
subunit B - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 541
Score = 36.3 bits (80), Expect = 0.90
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Frame = -3
Query: 507 PNIHFVPDPCTLTINGIHVGVTSTDILMHISQEEISLGTGGD-KLSRLASHVLSQQTYYP 331
PN FV +PC L G+ + + D++ + + + + G + + R + Q +
Sbjct: 401 PNARFVSNPCRLKYFGMEIVICREDLMGKMMRNLVVVKEGEEMNMKRYLVQTILDQAHLS 460
Query: 330 LCPAPVPLDXXXXXXXXXXXASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTG 166
P V P +VL + + GC V NP G G
Sbjct: 461 PLPISVRPTLWEYDHALRLYPMPSAVVLADKYERYELTYEGCHVFNPGKFVGGIG 515
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,944,288
Number of Sequences: 1657284
Number of extensions: 13702662
Number of successful extensions: 31054
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 30104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30998
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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