Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_B02
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060943-1|AAL28491.1|  609|Drosophila melanogaster GM08365p pro...   141   9e-34
AE014297-4093|AAF56680.3|  653|Drosophila melanogaster CG5923-PB...   140   2e-33
AE014297-4092|AAF56681.1|  653|Drosophila melanogaster CG5923-PA...   140   2e-33

>AY060943-1|AAL28491.1|  609|Drosophila melanogaster GM08365p protein.
          Length = 609

 Score =  141 bits (342), Expect = 9e-34
 Identities = 80/246 (32%), Positives = 138/246 (56%), Gaps = 11/246 (4%)
 Frame = -3

Query: 795  SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*L--VVWEILDSX 622
            S +  Y PL D++ Y   H P V+++TGPF D++H       +  D     ++  I++S 
Sbjct: 372  STDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMVGELAETFDTFFEKMIGGIMESI 431

Query: 621  GELSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVT 442
            G  S+T+    + +V++ KDA  ++VYPTPP   RR +PN++ +PDP  + ++G+ +GVT
Sbjct: 432  G--SHTA----VLVVTSQKDAMALSVYPTPPPSLRRTYPNLYMLPDPSLVDLDGLTLGVT 485

Query: 441  STDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCP---APVPLDXXXXXXXXXXX 271
            STD++ H+   E ++   G+++ R+ +H+  Q ++YPL P     +  D           
Sbjct: 486  STDVVDHLLSHEFAV-NAGERMHRVINHLFHQGSFYPLYPPADEDMAYDSQLALKYAQLK 544

Query: 270  ASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI------DSDNATKRIA 109
              P++L+LPS+ R+F++ VN C+V+NP  +     GGTF R L+       + N    +A
Sbjct: 545  QLPNVLILPSDQRHFIRLVNDCLVINPGRVA-DKKGGTFARFLVAPSVPGKAANMFNSVA 603

Query: 108  AQIVRI 91
             Q+ RI
Sbjct: 604  CQVQRI 609


>AE014297-4093|AAF56680.3|  653|Drosophila melanogaster CG5923-PB,
            isoform B protein.
          Length = 653

 Score =  140 bits (340), Expect = 2e-33
 Identities = 80/246 (32%), Positives = 136/246 (55%), Gaps = 11/246 (4%)
 Frame = -3

Query: 795  SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*L--VVWEILDSX 622
            S +  Y PL D++ Y   H P V+++TGPF D++H       +  D     ++  I++S 
Sbjct: 416  STDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMVGELAETFDTFFEKMIGGIMESI 475

Query: 621  GELSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVT 442
            G  S+T+    + +V++ KDA  ++VYPTPP   RR +PN++ +PDP  + ++G  +GVT
Sbjct: 476  G--SHTA----VLVVTSQKDAMALSVYPTPPPALRRTYPNLYMLPDPSLVDLDGFTLGVT 529

Query: 441  STDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCP---APVPLDXXXXXXXXXXX 271
            STD++ H+   E ++   G+++ R  +H+  Q ++YPL P     +  D           
Sbjct: 530  STDVVDHLLSHEFAV-NAGERMHRAINHLFHQGSFYPLYPPADEDMAYDSQLALKYAQLK 588

Query: 270  ASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI------DSDNATKRIA 109
              P++L+LPS+ R+F++ VN C+V+NP  +     GGTF R L+       + N    +A
Sbjct: 589  QLPNVLILPSDQRHFIRLVNDCLVINPGRVA-DKKGGTFARFLVAPSVPGKAANMFNSVA 647

Query: 108  AQIVRI 91
             Q+ RI
Sbjct: 648  CQVQRI 653


>AE014297-4092|AAF56681.1|  653|Drosophila melanogaster CG5923-PA,
            isoform A protein.
          Length = 653

 Score =  140 bits (340), Expect = 2e-33
 Identities = 80/246 (32%), Positives = 136/246 (55%), Gaps = 11/246 (4%)
 Frame = -3

Query: 795  SXNXAYXPLKDMVTYXNTHXPHVVIMTGPFXDSEHXQGQRQYDGRDI*L--VVWEILDSX 622
            S +  Y PL D++ Y   H P V+++TGPF D++H       +  D     ++  I++S 
Sbjct: 416  STDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMVGELAETFDTFFEKMIGGIMESI 475

Query: 621  GELSNTSPVTKIYIVSNLKDAFHVNVYPTPPYVSRRKHPNIHFVPDPCTLTINGIHVGVT 442
            G  S+T+    + +V++ KDA  ++VYPTPP   RR +PN++ +PDP  + ++G  +GVT
Sbjct: 476  G--SHTA----VLVVTSQKDAMALSVYPTPPPALRRTYPNLYMLPDPSLVDLDGFTLGVT 529

Query: 441  STDILMHISQEEISLGTGGDKLSRLASHVLSQQTYYPLCP---APVPLDXXXXXXXXXXX 271
            STD++ H+   E ++   G+++ R  +H+  Q ++YPL P     +  D           
Sbjct: 530  STDVVDHLLSHEFAV-NAGERMHRAINHLFHQGSFYPLYPPADEDMAYDSQLALKYAQLK 588

Query: 270  ASPHLLVLPSNFRYFVKDVNGCVVVNPEHLTKGTGGGTFTRVLI------DSDNATKRIA 109
              P++L+LPS+ R+F++ VN C+V+NP  +     GGTF R L+       + N    +A
Sbjct: 589  QLPNVLILPSDQRHFIRLVNDCLVINPGRVA-DKKGGTFARFLVAPSVPGKAANMFNSVA 647

Query: 108  AQIVRI 91
             Q+ RI
Sbjct: 648  CQVQRI 653


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,809,509
Number of Sequences: 53049
Number of extensions: 674020
Number of successful extensions: 1579
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)