Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_B02
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    31   0.017
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   4.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   7.7  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 30.7 bits (66), Expect = 0.017
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +1

Query: 454 VDTINGKSAGIRYKMYVGVFPSAHVRRRGVDINMESVLQIRYDIDFRDRTRVAQFSXTIE 633
           VD +  +  G+RY  ++G F +AH+   G+    E+     YD+       V +F   + 
Sbjct: 35  VDAVMSEGLGMRYA-FLGAFEAAHLNAEGMKKYCETYKNSIYDVSMTFGP-VPKFEGEMA 92

Query: 634 NFPNNELN 657
              +NELN
Sbjct: 93  EKISNELN 100


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 381 KLSRLASHVLSQQTYYPLCPAP 316
           K S+ + H  + QT+  LCP P
Sbjct: 364 KCSQTSVHYSNGQTHSQLCPTP 385


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 359 WLAKRDSLSPPVPSDISSWLMCMRISVL 442
           W+  R  L P   ++++ W   M+IS L
Sbjct: 348 WMETRGFLQPVCQNEMNKWWWNMKISNL 375


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 386 PPVPSDISSW 415
           PP P DIS W
Sbjct: 665 PPPPDDISGW 674


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,204
Number of Sequences: 438
Number of extensions: 4647
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)