Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_B01
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125830-1|BAC86311.1| 225|Homo sapiens protein ( Homo sapiens ... 33 1.6
AK092791-1|BAC03976.1| 133|Homo sapiens protein ( Homo sapiens ... 31 6.3
BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein. 30 8.3
BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open read... 30 8.3
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 30 8.3
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 30 8.3
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 30 8.3
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 30 8.3
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 30 8.3
AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein pr... 30 8.3
AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein. 30 8.3
AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 30 8.3
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 30 8.3
>AK125830-1|BAC86311.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ43842 fis, clone TESTI4006148. ).
Length = 225
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -2
Query: 773 PXPXWKLXGPXPPXXXPVVKH---VGVPRXGGPSTGPYPRACACSLPPSRSQCLLLXPVE 603
P P W+ P P V+ + P G P G C+ PP R + LL P E
Sbjct: 146 PQPAWRQEAPADPWLPVSVESPPSLSPPSEGSPPMGTCAGLCSTRAPPHR-KLLLDVPAE 204
Query: 602 KPVAYPRP 579
P P P
Sbjct: 205 DPNYLPLP 212
>AK092791-1|BAC03976.1| 133|Homo sapiens protein ( Homo sapiens
cDNA FLJ35472 fis, clone SMINT2007062. ).
Length = 133
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 773 PXPXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGPYPRACACSLPPSR 633
P P + GP P P G+PR GG S+ P + SL S+
Sbjct: 20 PPPSQRPLGPSPEGAGPSPPPPGIPRGGGSSSSEGPHSYFLSLVDSQ 66
>BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 739 PQXXXPL*STSVSPVQXARRQAXTPVHVPAPYPRREASAFC-CXQLRSQWPTPVHVPVDX 563
P P T+ P +R A T H+P P P+R A R Q P VP +
Sbjct: 331 PSKDGPKAPTACLPPPRPQRPAETKAHLPPPRPQRPAETNAHLPPPRPQRPAETKVPEEI 390
Query: 562 P 560
P
Sbjct: 391 P 391
>BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open reading
frame 95 protein.
Length = 257
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 716 KHVGVPRXGGPSTGPYPRACACSLPPSRSQ-CLLLXPVEKPVA 591
+H R GGP+ P PR CA PP S+ C P P A
Sbjct: 112 RHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRA 154
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 767 PXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGP 672
P + GP PP P V+ G+P GGP GP
Sbjct: 901 PPHGMKGPFPPHG-PFVRPGGMPGLGGPGPGP 931
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 767 PXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGP 672
P + GP PP P V+ G+P GGP GP
Sbjct: 901 PPHGMKGPFPPHG-PFVRPGGMPGLGGPGPGP 931
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 767 PXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGP 672
P + GP PP P V+ G+P GGP GP
Sbjct: 901 PPHGMKGPFPPHG-PFVRPGGMPGLGGPGPGP 931
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 767 PXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGP 672
P + GP PP P V+ G+P GGP GP
Sbjct: 901 PPHGMKGPFPPHG-PFVRPGGMPGLGGPGPGP 931
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 739 PQXXXPL*STSVSPVQXARRQAXTPVHVPAPYPRREASAFC-CXQLRSQWPTPVHVPVDX 563
P P T+ P +R A T H+P P P+R A R Q P VP +
Sbjct: 230 PSKDGPKAPTACLPPPRPQRPAETKAHLPPPRPQRPAETNAHLPPPRPQRPAETKVPEEI 289
Query: 562 P 560
P
Sbjct: 290 P 290
>AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 739 PQXXXPL*STSVSPVQXARRQAXTPVHVPAPYPRREASAFC-CXQLRSQWPTPVHVPVDX 563
P P T+ P +R A T H+P P P+R A R Q P VP +
Sbjct: 189 PSKDGPKAPTACLPPPRPQRPAETKAHLPPPRPQRPAETNAHLPPPRPQRPAETKVPEEI 248
Query: 562 P 560
P
Sbjct: 249 P 249
>AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 716 KHVGVPRXGGPSTGPYPRACACSLPPSRSQ-CLLLXPVEKPVA 591
+H R GGP+ P PR CA PP S+ C P P A
Sbjct: 112 RHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRA 154
>AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
Length = 257
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 716 KHVGVPRXGGPSTGPYPRACACSLPPSRSQ-CLLLXPVEKPVA 591
+H R GGP+ P PR CA PP S+ C P P A
Sbjct: 112 RHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWPRA 154
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR protein
rA4 protein.
Length = 1157
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 767 PXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGP 672
P + GP PP P V+ G+P GGP GP
Sbjct: 911 PPHGMKGPFPPHG-PFVRPGGMPGLGGPGPGP 941
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 767 PXWKLXGPXPPXXXPVVKHVGVPRXGGPSTGP 672
P + GP PP P V+ G+P GGP GP
Sbjct: 683 PPHGMKGPFPPHG-PFVRPGGMPGLGGPGPGP 713
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,900,046
Number of Sequences: 237096
Number of extensions: 1658195
Number of successful extensions: 3962
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3955
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -