Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_B01
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41991-12|AAA83352.1|  251|Caenorhabditis elegans Hypothetical p...    35   0.076
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    33   0.31 
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    33   0.31 
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    29   5.0  

>U41991-12|AAA83352.1|  251|Caenorhabditis elegans Hypothetical
           protein C42D4.1 protein.
          Length = 251

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 21/52 (40%), Positives = 26/52 (50%)
 Frame = +2

Query: 521 YGNGHGLLNVHGVRXVDRNMDGGRPLASQLGTAKGTGFSTGVRSRHMHGGXG 676
           +G+GHG    HG R   RN+ GG       G   G+G S G   RH +GG G
Sbjct: 171 HGHGHGHRFHHG-RRFGRNIGGGAAPRYN-GGGIGSGISIGENPRHHNGGIG 220


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 749 GPXPPXXXPVVKHVGVPRXGGPSTGPYPRACACSLPPSRSQCLLLXPVEKPVAYPRP 579
           GP  P   P  +H   P      +GP P + A  +PP  S   ++ P   P AYP P
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSG--MMPPRGMPGAYPPP 162


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 749 GPXPPXXXPVVKHVGVPRXGGPSTGPYPRACACSLPPSRSQCLLLXPVEKPVAYPRP 579
           GP  P   P  +H   P      +GP P + A  +PP  S   ++ P   P AYP P
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSG--MMPPRGMPGAYPPP 162


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
 Frame = +2

Query: 524 GNGHGLLNVHGVRXVDRNMDGGRPLASQLGTAKGTGFSTGVRS-RHMHGGXGLSTGXLXG 700
           G+GH     HG      +  G        G   G G  +G    RH HGG G   G   G
Sbjct: 276 GSGHHRGGRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHG 335

Query: 701 GHRRASQRGXGLG 739
           GH R   R    G
Sbjct: 336 GHGRHGSRSGSPG 348


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
 Frame = +2

Query: 551 HGVRXVDRNMDGGRPLASQLGTAKGTGFSTG-VRSRHMHGGXGLSTGXLXGGHRRASQRG 727
           H  R    N  GGR        + G G STG  R R   G  G   G   GG+ R    G
Sbjct: 799 HKSRHNSENRSGGRGYGQNYSHSYG-GNSTGSYRGRSSGGSGGSGRGGGRGGYSRGHGGG 857

Query: 728 XGLG 739
            G G
Sbjct: 858 SGGG 861


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
 Frame = +2

Query: 551 HGVRXVDRNMDGGRPLASQLGTAKGTGFSTG-VRSRHMHGGXGLSTGXLXGGHRRASQRG 727
           H  R    N  GGR        + G G STG  R R   G  G   G   GG+ R    G
Sbjct: 796 HKSRHNSENRSGGRGYGQNYSHSYG-GNSTGSYRGRSSGGSGGSGRGGGRGGYSRGHGGG 854

Query: 728 XGLG 739
            G G
Sbjct: 855 SGGG 858


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,686,605
Number of Sequences: 27780
Number of extensions: 241517
Number of successful extensions: 573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)