Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_A24
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0012 - 210670-210759,210939-211008,211138-211235,211318-21...    56   2e-08
03_02_0154 + 5967512-5967658,5968206-5968652,5968766-5968846,596...    38   0.009
01_05_0085 - 17995800-17995985,17996724-17996823,17996919-179971...    38   0.009

>04_01_0012 -
           210670-210759,210939-211008,211138-211235,211318-211427,
           211533-211683,212247-212391,212483-212749,212819-212957,
           213036-213270
          Length = 434

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/74 (31%), Positives = 42/74 (56%)
 Frame = -2

Query: 743 DLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQL 564
           ++ +  II  L+I + +VE ++++ +  +++  ++DQ  + + VS    R FG  QWQ L
Sbjct: 338 EIPYHAIIDALKINDDEVEYWIVKAISCKILDCKVDQLNQVIIVSRHTERIFGMPQWQSL 397

Query: 563 RDVLLAWRANVHQA 522
           R  L  WR N+  A
Sbjct: 398 RSKLGVWRGNIASA 411


>03_02_0154 +
           5967512-5967658,5968206-5968652,5968766-5968846,
           5969058-5969075,5969552-5969748,5969844-5969943,
           5970676-5970861
          Length = 391

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -2

Query: 725 IISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLA 546
           I    ++   DVE  +++ L   L+   +D+   TV VS    R  G  Q + LR+ L A
Sbjct: 310 IAERTKLSISDVEYLLMKSLSVHLIEGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDA 369

Query: 545 WRANVH 528
           W   VH
Sbjct: 370 WVGKVH 375


>01_05_0085 -
           17995800-17995985,17996724-17996823,17996919-17997115,
           17997836-17997916,17998046-17998492,17998774-17998920
          Length = 385

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -2

Query: 725 IISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLA 546
           I    ++   DVE  +++ L   L+   +D+   TV VS    R  G  Q + LR+ L A
Sbjct: 304 IAERTKLSISDVEYLLMKSLSVHLIEGIIDEVDSTVHVSWVQPRVLGIPQVKALRERLDA 363

Query: 545 WRANVH 528
           W   VH
Sbjct: 364 WVGKVH 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,321,019
Number of Sequences: 37544
Number of extensions: 255908
Number of successful extensions: 483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)