Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_A21
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 72 2e-12
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 72 2e-12
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 72 2e-12
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 38 0.036
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 38 0.036
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 38 0.048
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 72.1 bits (169), Expect = 2e-12
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = -3
Query: 532 PFAAAGFNVSYSDNGLFGVVL----SVPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLK 365
PF + FN SYSD+GLFG+ + D + +LS ++A KN+LK
Sbjct: 320 PFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKRIAQGNLSNTDVQAAKNKLK 379
Query: 364 TQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKISIG 185
L ++ E + +Q L GS + + ID ++N DI A + S+
Sbjct: 380 AGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMA 439
Query: 184 AVGNLAFVPYIDEL 143
A GNL P++DEL
Sbjct: 440 ASGNLGHTPFVDEL 453
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 72.1 bits (169), Expect = 2e-12
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = -3
Query: 532 PFAAAGFNVSYSDNGLFGVVL----SVPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLK 365
PF + FN SYSD+GLFG+ + D + +LS ++A KN+LK
Sbjct: 320 PFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLK 379
Query: 364 TQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKISIG 185
L ++ E + +Q L GS + + ID ++N DI A + S+
Sbjct: 380 AGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMA 439
Query: 184 AVGNLAFVPYIDEL 143
A GNL P++DEL
Sbjct: 440 ASGNLGHTPFVDEL 453
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 72.1 bits (169), Expect = 2e-12
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = -3
Query: 532 PFAAAGFNVSYSDNGLFGVVL----SVPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLK 365
PF + FN SYSD+GLFG+ + D + +LS ++A KN+LK
Sbjct: 320 PFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLK 379
Query: 364 TQVLNEADTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKISIG 185
L ++ E + +Q L GS + + ID ++N DI A + S+
Sbjct: 380 AGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMA 439
Query: 184 AVGNLAFVPYIDEL 143
A GNL P++DEL
Sbjct: 440 ASGNLGHTPFVDEL 453
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.036
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = -3
Query: 514 FNVSYSDNGLFGVVL---SVPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEA 344
FN SY+D GL+G+ + S + TS++ + +N LKT +L +
Sbjct: 344 FNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQL 403
Query: 343 DTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKI-SIGAVGNLA 167
D + + E + Q L ++ ID ++ I + + N+ +I AVG +
Sbjct: 404 DGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIK 463
Query: 166 FVP 158
+P
Sbjct: 464 QLP 466
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 37.9 bits (84), Expect = 0.036
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = -3
Query: 514 FNVSYSDNGLFGVVL---SVPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEA 344
FN SY+D GL+G+ + S + TS++ + +N LKT +L +
Sbjct: 180 FNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQL 239
Query: 343 DTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKI-SIGAVGNLA 167
D + + E + Q L ++ ID ++ I + + N+ +I AVG +
Sbjct: 240 DGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIK 299
Query: 166 FVP 158
+P
Sbjct: 300 QLP 302
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 37.5 bits (83), Expect = 0.048
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = -3
Query: 514 FNVSYSDNGLFGVVL---SVPKDEXXXXXXXXXXXXKTSLSADAIKAGKNQLKTQVLNEA 344
FN SY+D GL+G+ + S + TS++ + +N LKT +L +
Sbjct: 353 FNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQL 412
Query: 343 DTGSSLAESLAAQGLYTGSVRSAVDIAKDIDQISNNDISQAVSNAAKNKI-SIGAVGNLA 167
D + + E + Q L ++ ID ++ I + + N+ +I AVG
Sbjct: 413 DGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGKPG 472
Query: 166 F 164
F
Sbjct: 473 F 473
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,479,648
Number of Sequences: 237096
Number of extensions: 1340805
Number of successful extensions: 2544
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2540
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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