Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_A15
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   1.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.1  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.4  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 109 CHYCRKTLSTLACFKGIVQSHPALYRLHL 195
           C YC K   +L   K  +++H    + HL
Sbjct: 19  CKYCEKVYVSLGALKMHIRTHTLPCKCHL 47


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 460 CYCCDCLGLAGS 495
           C+CCD LG  GS
Sbjct: 13  CWCCDNLGGPGS 24


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 43  YKSTLHTW 66
           YKSTLH W
Sbjct: 253 YKSTLHCW 260


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 43  YKSTLHTW 66
           YKSTLH W
Sbjct: 253 YKSTLHCW 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,465
Number of Sequences: 438
Number of extensions: 4266
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)