Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_A09
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8...   118   2e-26
AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens ...   118   2e-26

>AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8
           protein.
          Length = 467

 Score =  118 bits (284), Expect = 2e-26
 Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
 Frame = -2

Query: 731 RPLQKYFVRSVNNSGDVEARSSMHLAATMAGVGIGNAGVHLCHGLAYPIAGNVKSFVPED 552
           R + KY  R+V N  D+EARS MHLA+  AG+G GNAGVHLCHG++YPI+G VK +  +D
Sbjct: 288 RIVAKYLKRAVRNPDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKD 347

Query: 551 YG-SNPIIPHGLSVVMTAPAVFRFTASSDP 465
           Y   +P++PHGLSVV+T+PAVF FTA   P
Sbjct: 348 YNVDHPLVPHGLSVVLTSPAVFTFTAQMFP 377



 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/60 (46%), Positives = 43/60 (71%)
 Frame = -3

Query: 466 PEKHLEAASLLGADVTNAKRKDAGRILSDVILLYMDKLKIENGLKALGYTNDDIPDLVQG 287
           PE+HLE A +LGAD   A+ +DAG +L+D +  ++  L +++GL A+GY+  DIP LV+G
Sbjct: 377 PERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGLAAVGYSKADIPALVKG 436


>AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32430 fis, clone SKMUS2001129, weakly similar to
           NAD-DEPENDENT METHANOL DEHYDROGENASE (EC 1.1.1.244). ).
          Length = 419

 Score =  118 bits (284), Expect = 2e-26
 Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
 Frame = -2

Query: 731 RPLQKYFVRSVNNSGDVEARSSMHLAATMAGVGIGNAGVHLCHGLAYPIAGNVKSFVPED 552
           R + KY  R+V N  D+EARS MHLA+  AG+G GNAGVHLCHG++YPI+G VK +  +D
Sbjct: 240 RIVAKYLKRAVRNPDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKD 299

Query: 551 YG-SNPIIPHGLSVVMTAPAVFRFTASSDP 465
           Y   +P++PHGLSVV+T+PAVF FTA   P
Sbjct: 300 YNVDHPLVPHGLSVVLTSPAVFTFTAQMFP 329



 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/60 (46%), Positives = 43/60 (71%)
 Frame = -3

Query: 466 PEKHLEAASLLGADVTNAKRKDAGRILSDVILLYMDKLKIENGLKALGYTNDDIPDLVQG 287
           PE+HLE A +LGAD   A+ +DAG +L+D +  ++  L +++GL A+GY+  DIP LV+G
Sbjct: 329 PERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGLAAVGYSKADIPALVKG 388


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,944,382
Number of Sequences: 237096
Number of extensions: 1620065
Number of successful extensions: 3261
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3259
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)