Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_A05
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787...    35   0.083
12_02_0910 + 24225180-24225415,24225523-24225678,24226387-242264...    30   1.8  
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333...    30   2.4  
11_01_0428 + 3279662-3279784,3281676-3281756,3281845-3281933,328...    29   4.1  
07_03_0862 + 22075395-22075714,22075716-22076307                       29   5.5  
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697...    28   7.2  
07_03_1228 - 25009736-25010965                                         28   9.6  

>01_01_0995 +
           7875273-7875495,7876196-7876274,7876422-7876536,
           7878507-7878761
          Length = 223

 Score = 34.7 bits (76), Expect = 0.083
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 476 GSYSYEDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHYREEP-REYKASSRDVG 303
           G++     Y PP PP+ G  + A P   Y +G + +Y     Y+  P R+Y+A +R  G
Sbjct: 29  GTFQGPPSYPPPRPPVVGYPQPAPPPGLYGQG-DPYYRPRGGYQGIPARDYEAGARGHG 86


>12_02_0910 +
           24225180-24225415,24225523-24225678,24226387-24226450,
           24226738-24226947,24227678-24227866,24228044-24228342,
           24228575-24228851,24229045-24229317,24230316-24230549,
           24230707-24230856
          Length = 695

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = -1

Query: 506 TLERARTAMEGSYSYEDHYAPPEPPMRGGGRAAEPDVYYERG 381
           TL R R      YS    YAPPEP +    R  E DV+   G
Sbjct: 25  TLLRRRPPYVAVYSPRRPYAPPEPWLPAAWRRTEADVHAAAG 66


>01_07_0226 +
           42130300-42131430,42131530-42131715,42133244-42133345,
           42133425-42133481,42133563-42133658,42133736-42133828,
           42133945-42134064,42134155-42134187,42134266-42134316,
           42135129-42135191
          Length = 643

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = -1

Query: 404 PDVYYERGHERFYEDEAHYREEPREYKASSRD 309
           P + YE+G+ ++YED   +  +P  ++ ++ D
Sbjct: 398 PSILYEKGYFQYYEDSLEWYFDPERFQPAALD 429


>11_01_0428 +
           3279662-3279784,3281676-3281756,3281845-3281933,
           3282011-3282085,3282211-3282269,3282316-3282414,
           3282762-3283013,3283050-3283180
          Length = 302

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 425 GGGRAAEPDVYYERGHERFYEDEAHYREEPREYKASSR 312
           GG R      Y   G   +YED+  Y EEP +Y    R
Sbjct: 222 GGRRGGYGYDYGYGGRGDYYEDQGEYFEEPEDYPPPGR 259


>07_03_0862 + 22075395-22075714,22075716-22076307
          Length = 303

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 731 IAPPAEAHARIAYALAEVKKYLVPDTNETVWMS 633
           +AP   AH R+ + L E+ K LV DT E V+ +
Sbjct: 127 LAPRYYAHCRLYWVLKEMDKLLVLDTCEMVFFT 159


>02_02_0119 +
           6978697-6979045,6979519-6979581,6979757-6979866,
           6979969-6980154,6980266-6980361,6980493-6980564,
           6980798-6980909,6982448-6982534,6982680-6983872
          Length = 755

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = -1

Query: 497 RARTAMEGSYSYEDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHYREEPREYKAS 318
           RAR  M G YS +  Y PP P    G     P    + G+   Y     Y   P +Y A 
Sbjct: 368 RARNPMSGGYS-QQGYRPPRPQSNWGPHGGAP--MQQPGYG--YMQPGAYPGAPPQYGAP 422

Query: 317 SRDVGT 300
            +  G+
Sbjct: 423 QQPYGS 428


>07_03_1228 - 25009736-25010965
          Length = 409

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/51 (33%), Positives = 20/51 (39%)
 Frame = -1

Query: 461 EDHYAPPEPPMRGGGRAAEPDVYYERGHERFYEDEAHYREEPREYKASSRD 309
           E+     E P  GG    EP+   E G E   E+E    EEP E      D
Sbjct: 310 EEEEEEEEEPEEGGEEEEEPE---EGGEEEEEEEEEEEEEEPEEGAEEEED 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,693,603
Number of Sequences: 37544
Number of extensions: 224116
Number of successful extensions: 807
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)