Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_T7_A04
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       26   0.46 
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    24   1.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 563 SLXGGLLDRGNVEDTVGIDVEG-DLN 637
           SL GGL D G V   V +D  G D+N
Sbjct: 463 SLAGGLYDEGTVRRRVAVDRSGIDIN 488


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 547 YQRQRSSLPRKRSSVWLMRQRSTETRMTSKRRPSR 443
           Y RQ S   ++R  +  MR+R  E R  S R  S+
Sbjct: 55  YHRQHSKNEQQRKEMEQMREREREQREHSDRVTSQ 89


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 547 YQRQRSSLPRKRSSVW 500
           YQR  S + RK+SS W
Sbjct: 119 YQRNPSVVGRKKSSGW 134


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 407 KSTMEDEKLKEKISDSDKQTILDKCN 330
           + +++ EK+K  +S    +T+  KCN
Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 648 PRGAGGIPVS 677
           PRG GG+P S
Sbjct: 399 PRGPGGVPTS 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,883
Number of Sequences: 438
Number of extensions: 3706
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)