Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_T7_A03
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0081 + 20745627-20748144,20748211-20748308 32 0.44
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 32 0.58
05_05_0175 + 22966151-22967614 31 0.77
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 31 1.0
02_05_0363 - 28297295-28298167 31 1.3
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 31 1.3
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 30 1.8
02_02_0679 - 12875988-12876016,12876186-12876306,12877792-12877974 30 1.8
02_01_0247 - 1632425-1632646,1632873-1632958,1633209-1633332,163... 29 3.1
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 29 4.1
06_03_1375 + 29681045-29681395 29 4.1
01_05_0230 + 19543410-19543722,19544165-19544238 29 4.1
12_01_0079 + 644754-645932,645966-646061,646193-647122 29 5.4
02_05_0111 - 25928657-25929355 29 5.4
01_07_0026 + 40576826-40577114,40577210-40577354,40577736-405778... 29 5.4
10_06_0172 + 11473892-11474896 28 7.1
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 7.1
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 28 7.1
01_06_1682 - 39130696-39131705,39132355-39132583 28 7.1
01_06_1179 - 35161229-35162368 28 7.1
11_01_0078 + 609005-610183,610217-610312,610444-611373 28 9.4
02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881 28 9.4
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 32.3 bits (70), Expect = 0.44
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +1
Query: 394 ASEIPHRTAGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTPPPGR*ARPGEH*A 573
+S PH + P P LR+R P+ P A A P + +P P H
Sbjct: 481 SSSTPHVPTTSLALRSPAPHLRVRHMPAPPVPTPPAPAPPVSTLPSP------APSVH-T 533
Query: 574 DPVAYHTYSGPPAAHDTTSAPHV-TPITTTSLAHTRPKLPS 693
PV + PPA AP V TP + S T P++PS
Sbjct: 534 PPV-----TAPPATAPPMIAPPVATPPDSASSPSTVPRMPS 569
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 31.9 bits (69), Expect = 0.58
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = -3
Query: 653 VMGVTWGA-DVVSWAAGGPEYVWYATGSA-QCSPGRAHLPGGGVSTARLGSAEAVCCGVL 480
+ G+ W A + + W G + W G C PG +P V+ L ++ GVL
Sbjct: 1252 IQGLGWAALEELKW--GDDNHKWIRPGHLFTCGPGSYKIPS--VNDIPLNFKVSLLKGVL 1307
Query: 479 XXXXXXXXXXXXGPPLLDAPAVLWGISDAHHAGR 378
PP AVL+ I DA A R
Sbjct: 1308 NPKVIHSSKAVGEPPFFLGSAVLFAIKDAISAAR 1341
>05_05_0175 + 22966151-22967614
Length = 487
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 376 RRPAWCASEIPHRTAGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTPPPGR*AR 555
RR A + + TA A R R +P + P+H S L R+ + PPP R +R
Sbjct: 245 RRGARSSKQDEEATASARRRAQSLRRASGREQPKQPPPRHHVSTLQRKESEPPPPPRQSR 304
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 394 ASEIPHRTAGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTPPP 540
A +P+ + G + GGPRP L + PS P+ S PR +T PP
Sbjct: 477 ADRMPY-SYGCEQGGGPRPFLD-QPSPSAWAPEAPNSEAPRNMPETVPP 523
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +1
Query: 442 PRPALRLRCRPSRSTPQHTASALPRRAVDTPPPGR*ARPGEH*ADPVAYHTYSGPPAAHD 621
P P R CR +++ + A+ + P PGR R H DP + P H+
Sbjct: 210 PSPMRRTPCRRRQTSTMPSGFAVCLSPLVRPSPGRRHRHA-HPPDPGTFSCELRPSPLHN 268
Query: 622 TTSAPHVTPITTTSLA 669
+SA +T + LA
Sbjct: 269 LSSAASITRCRSRKLA 284
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/92 (26%), Positives = 29/92 (31%)
Frame = +1
Query: 406 PHRTAGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTPPPGR*ARPGEH*ADPVA 585
P R A R P + P+ P D PPP P A+P
Sbjct: 56 PERIVKAIRKTKRVPTIFSHTDPAAPPPPPAEGEAAPPPADAPPPEE--APA---AEPAP 110
Query: 586 YHTYSGPPAAHDTTSAPHVTPITTTSLAHTRP 681
PPA D +AP T T + H P
Sbjct: 111 SEAAPPPPAEADQAAAPPATDATVIHMVHDYP 142
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Frame = +1
Query: 295 RVKSARISFSRPSPWGRGV*VLAQGPGRRPAWCASEIPHRTAGASRSGGPRPALRLRCRP 474
R +A + + P P G V A+G R P + AGA SGG R + RP
Sbjct: 9 RAPAAHAAVAAPKPPGDAV--AAEGEARAPPRPPPAVA-AGAGAGASGGGRRVFSVELRP 65
Query: 475 SRSTPQHTASALPR----RAVDTPPPGR*ARP 558
+T L A+ PPP A+P
Sbjct: 66 GETTIVSWRKMLKEADLGAALPPPPPAAAAQP 97
>02_02_0679 - 12875988-12876016,12876186-12876306,12877792-12877974
Length = 110
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 380 RRPGPCASTYTPRPHGDGLLNEIRADFT 297
RR G AS Y P P GDG L + FT
Sbjct: 15 RRHGRTASAYQPHPSGDGGLEVVPGPFT 42
>02_01_0247 -
1632425-1632646,1632873-1632958,1633209-1633332,
1633622-1633729,1634297-1634378,1634718-1634770,
1634866-1634949,1635092-1635249,1635326-1635805,
1636340-1636709
Length = 588
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 295 RVKSARISFSRPSPWGRGV*VLAQGPGRRPAW 390
RV + +SF W RGV V+A G G +W
Sbjct: 25 RVVGSAVSFGGRGRWRRGVAVVAAGAGAEASW 56
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 629 DVVSWAAGGPEYVWYATG-SAQCSPGRAHLPGGG---VSTARLGSAEAVCCGV 483
D + WA G EYV +TG AHL GG V +A A CGV
Sbjct: 108 DEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGV 160
>06_03_1375 + 29681045-29681395
Length = 116
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 382 PAWCASEIP-HRTAGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTPPPGR*ARP 558
PAWC E+P A A+ + P A + R S + A A+P + PPP + ARP
Sbjct: 52 PAWCLDEVPVVVAASAAPAATPVKAKQGHVRDSHWS-DSDAFAVPEFS-PPPPPAKRARP 109
>01_05_0230 + 19543410-19543722,19544165-19544238
Length = 128
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +1
Query: 412 RTAGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTP 534
R G R G P LRLRCR S P S P + TP
Sbjct: 38 RAEGEEREGAAHP-LRLRCRRRPSPPPAPPSTPPPASPPTP 77
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 638 WGADVVSWAAG--GPEYVWYATGSAQCSPGRAHLPGGGVSTARLG 510
WG +V + G GP+ W + Q + G +HL GG S+ G
Sbjct: 629 WGTPLVQESLGLRGPQTEWLLPNTNQFNHGASHLNGGTRSSVGSG 673
>02_05_0111 - 25928657-25929355
Length = 232
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 611 AGGPEYVWYATGSAQCSPGRAHLPGGGVSTARLGSAEAVCCGV 483
AGG W A +A C+ L G GV++A LG A GV
Sbjct: 165 AGGFVRPWAARVAAVCAASSLGLAGFGVASAYLGGAGVARSGV 207
>01_07_0026 +
40576826-40577114,40577210-40577354,40577736-40577801,
40578012-40578021
Length = 169
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 342 SPWRRSAERNPSGLHPKFEL 283
+PW RS+ R P+ +HP+F +
Sbjct: 115 NPWLRSSSRIPNRIHPEFNM 134
>10_06_0172 + 11473892-11474896
Length = 334
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 635 GADVVSWAAGGPEYVWYATGSAQCSPGRAHLP 540
GA S GG +VW SAQC PGR P
Sbjct: 180 GAHGSSAPGGGAVHVWVGDASAQC-PGRCAWP 210
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/74 (29%), Positives = 25/74 (33%)
Frame = +1
Query: 418 AGASRSGGPRPALRLRCRPSRSTPQHTASALPRRAVDTPPPGR*ARPGEH*ADPVAYHTY 597
AG S G AL + Q A ALPR PPP + P H
Sbjct: 102 AGESAPVGAPIALLAESEEEVAVAQARAQALPRGPGQEPPPPHVPKAAPPPPPPPPPHAP 161
Query: 598 SGPPAAHDTTSAPH 639
GPP + PH
Sbjct: 162 PGPPPTKG-VATPH 174
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 487 PQHTASALPRRAVDTPPPGR*ARPGEH*ADPVAYHTYSGPPAAHDTTSAPHVTPITTTSL 666
P+H + P A +PPP A E A P + PA + + + P +P T +
Sbjct: 10 PEHPPTPAPAPAPASPPPHPAASGNEAAAPPKPNPPITPAPARNASAAPPSGSPATAAAA 69
Query: 667 A 669
A
Sbjct: 70 A 70
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 487 PQHTASALPRRAVDTPPPGR*ARPGEH*ADPVAYHTYSGPPAAHDTTSAP 636
P H + P+ + +PPP + P + A P +Y+ + PP +++ P
Sbjct: 223 PSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSYN-HPPPPYGYNSPIPP 271
>01_06_1179 - 35161229-35162368
Length = 379
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 466 CRPSRSTPQHTASALPRRA 522
CRP +TP+H A +LP RA
Sbjct: 57 CRPLPNTPRHGALSLPHRA 75
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 638 WGADVVSWAAG--GPEYVWYATGSAQCSPGRAHLPGGGVSTARLG 510
WG +V + G GP+ W + Q + G +HL GG S+ G
Sbjct: 629 WGTPLVQESLGLRGPQTEWLLPNANQFNHGVSHLNGGTRSSVGSG 673
>02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881
Length = 463
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 376 RRPAWCASEIPHRTAGASRSGGPR---PALRLRCRPSRSTPQHTASALP 513
R P W A+ P + R PR P +R RC STP +A+A P
Sbjct: 7 RLPTWAAAAPPSPSDWDGRR--PRRGAPVVRRRCSAPSSTPAPSAAAAP 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,008,929
Number of Sequences: 37544
Number of extensions: 339905
Number of successful extensions: 1355
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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