Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_P24
         (1031 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    39   3e-04
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   2.8  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   2.8  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   3.7  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 38.7 bits (86), Expect = 3e-04
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +3

Query: 600 YTYQPYTVEKKVPYEVK----VHVDKPYEVKVPVDRPYNVYVPKPYPSMLKAYQ 749
           Y   P  +EK VPY V+    + V+KP+ V+V   + + V VPKPYP  +  Y+
Sbjct: 213 YKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVL--KKFEVPVPKPYPVPVTVYK 264



 Score = 35.9 bits (79), Expect = 0.002
 Identities = 14/43 (32%), Positives = 28/43 (65%)
 Frame = +3

Query: 612 PYTVEKKVPYEVKVHVDKPYEVKVPVDRPYNVYVPKPYPSMLK 740
           P+ V   VP+ VKV++ +PY ++V V++P  + + K  P +++
Sbjct: 179 PHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIE 221



 Score = 32.3 bits (70), Expect = 0.024
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 633 VPYEVKVHVDKPYEVKVPVDRPYNVYVPKPYPSMLKAYQ 749
           VP   KV V  P+ V + V     VY+P+PYP  +   Q
Sbjct: 168 VPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQ 206



 Score = 31.5 bits (68), Expect = 0.042
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
 Frame = +3

Query: 600 YTYQPYTVEKKVPYEVKVHVDK--PYEVKVP----VDRPYNVYVPKPYP-SMLKAYQ 749
           Y  QPY ++  V   +K+ + K  P  ++ P    V++PY + V KP+P  +LK ++
Sbjct: 193 YIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFE 249



 Score = 23.8 bits (49), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 633 VPYEVKVHVDKPYEVKVPVDRPYNVYVPKPYPSMLKAYQ 749
           VP+ V + V  P+ VKV + +PY + V    P  +  Y+
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIPIYK 214


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 424 AHQNC*GGKEGACSVYSRETRPLY 495
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 231 KPTAVTKAMEGTKVSASVT-KKDTTSEA 311
           +PT  T A EGT V++  T +  TT+EA
Sbjct: 115 RPTTSTAAPEGTSVASPTTAEASTTTEA 142


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 612 PYTVEKKVPYEVKVHVDKPYEVKVPVDRP 698
           P T EK+ P+  K     PY+V VP  RP
Sbjct: 215 PPTKEKRKPFFKKQETSSPYDV-VPSMRP 242



 Score = 23.8 bits (49), Expect = 8.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 110 RPTMPPK*PCTSLWSPNDAEDLCPVGQQXSRI 15
           R T PP  P  S+  P  +++  P G+Q  R+
Sbjct: 422 RATHPPVRPTPSVPRPLPSQEASPSGEQPGRM 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,076
Number of Sequences: 2352
Number of extensions: 12989
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 114285522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)