Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P23
(952 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 352 2e-97
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 352 2e-97
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 352 2e-97
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 350 8e-97
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 326 1e-89
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 326 1e-89
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 325 2e-89
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 323 1e-88
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 321 4e-88
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 320 7e-88
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 320 7e-88
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 316 1e-86
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 301 3e-82
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 297 6e-81
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 284 6e-77
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 254 9e-68
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 168 4e-42
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 167 1e-41
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 166 2e-41
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 164 7e-41
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 164 7e-41
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 149 4e-36
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 149 4e-36
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 93 2e-19
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 93 2e-19
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.69
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.9
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.9
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.9
U80031-5|AAB37615.1| 547|Caenorhabditis elegans Hypothetical pr... 29 6.5
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 8.5
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 8.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 352 bits (866), Expect = 2e-97
Identities = 164/207 (79%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 647 VVEPYNSILTPTHP*AL*LC-FMVDNE 724
VVEPYNSILT C FMVDNE
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNE 207
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/55 (49%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR IG IVSSI SL FDG Q VP P
Sbjct: 209 IYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 352 bits (866), Expect = 2e-97
Identities = 164/207 (79%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 647 VVEPYNSILTPTHP*AL*LC-FMVDNE 724
VVEPYNSILT C FMVDNE
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNE 207
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/55 (49%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR IG IVSSI SL FDG Q VP P
Sbjct: 209 IYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 352 bits (866), Expect = 2e-97
Identities = 164/207 (79%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 647 VVEPYNSILTPTHP*AL*LC-FMVDNE 724
VVEPYNSILT C FMVDNE
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNE 207
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/55 (49%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR IG IVSSI SL FDG Q VP P
Sbjct: 209 IYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 350 bits (861), Expect = 8e-97
Identities = 163/206 (79%), Positives = 178/206 (86%), Gaps = 1/206 (0%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 649
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 650 VEPYNSILTPTHP*AL*LC-FMVDNE 724
VEPYNSILT C FMVDNE
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNE 206
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/55 (49%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR IG IVSSI SL FDG Q VP P
Sbjct: 208 IYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 262
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 326 bits (802), Expect = 1e-89
Identities = 155/208 (74%), Positives = 174/208 (83%), Gaps = 2/208 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 647 VVEPYNSILTPTHP*A--L*LCFMVDNE 724
VVEPYNSILT TH FMVDNE
Sbjct: 179 VVEPYNSILT-THTTLEHSDCAFMVDNE 205
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR I +VSSI SL FDG Q VP P
Sbjct: 207 IYDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 261
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 326 bits (802), Expect = 1e-89
Identities = 155/208 (74%), Positives = 174/208 (83%), Gaps = 2/208 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 647 VVEPYNSILTPTHP*A--L*LCFMVDNE 724
VVEPYNSILT TH FMVDNE
Sbjct: 179 VVEPYNSILT-THTTLEHSDCAFMVDNE 205
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR I +VSSI SL FDG Q VP P
Sbjct: 207 IYDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 261
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 325 bits (799), Expect = 2e-89
Identities = 154/208 (74%), Positives = 174/208 (83%), Gaps = 2/208 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 647 VVEPYNSILTPTHP*A--L*LCFMVDNE 724
VVEPYNSILT TH FMVDNE
Sbjct: 179 VVEPYNSILT-THTTLEHSDCAFMVDNE 205
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR +S TNLNR I +VSSI SL FDG Q VP P
Sbjct: 207 IYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 261
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 323 bits (794), Expect = 1e-88
Identities = 153/208 (73%), Positives = 173/208 (83%), Gaps = 2/208 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 647 VVEPYNSILTPTHP*A--L*LCFMVDNE 724
VVEPYNSILT TH FMVDNE
Sbjct: 179 VVEPYNSILT-THTTLEHSDCAFMVDNE 205
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR +S TNLNR I +VSSI SL FDG Q VP P
Sbjct: 207 IYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 261
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 321 bits (789), Expect = 4e-88
Identities = 149/208 (71%), Positives = 170/208 (81%), Gaps = 1/208 (0%)
Frame = +2
Query: 104 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 283
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 284 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 463
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 464 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 643
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 644 AVVEPYNSILTPTHP*AL*LC-FMVDNE 724
++VEPYNSILT C FMVDNE
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFMVDNE 212
Score = 41.5 bits (93), Expect = 9e-04
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + TNLNR I ++SS+ SL FDG Q VP P
Sbjct: 214 IYDICRRNLDLARPTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYP 268
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 320 bits (787), Expect = 7e-88
Identities = 152/208 (73%), Positives = 172/208 (82%), Gaps = 2/208 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 647 VVEPYNSILTPTHP*A--L*LCFMVDNE 724
VVEPYNSILT TH FMVDNE
Sbjct: 179 VVEPYNSILT-THTTLEHSDCAFMVDNE 205
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI +R + TNLNR I +VSSI SL FDG Q VP P
Sbjct: 207 IYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 261
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 320 bits (787), Expect = 7e-88
Identities = 152/208 (73%), Positives = 172/208 (82%), Gaps = 2/208 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 647 VVEPYNSILTPTHP*A--L*LCFMVDNE 724
VVEPYNSILT TH FMVDNE
Sbjct: 179 VVEPYNSILT-THTTLEHSDCAFMVDNE 205
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI +R + TNLNR I +VSSI SL FDG Q VP P
Sbjct: 207 IYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 261
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 316 bits (777), Expect = 1e-86
Identities = 140/193 (72%), Positives = 166/193 (86%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 647 VVEPYNSILTPTH 685
+VEPYNS+LT TH
Sbjct: 181 MVEPYNSLLT-TH 192
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXR-RISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IY+I + + T+LNR + +VSSI SL FDG Q VP P
Sbjct: 209 IYEITKVNLGVRSPTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYP 263
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 301 bits (740), Expect = 3e-82
Identities = 142/207 (68%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 647 VVEPYNSILTPTHP*AL*LC-FMVDNE 724
VVEPYNSILT C FMVDNE
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNE 204
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 IYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXXXGPPXXQNXXVPXP 888
IYDI RR + NLNR I +VSSI SL FDG Q VP P
Sbjct: 206 IYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYP 260
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 297 bits (730), Expect = 6e-81
Identities = 141/206 (68%), Positives = 162/206 (78%), Gaps = 1/206 (0%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 649
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 650 VEPYNSIL-TPTHP*AL*LCFMVDNE 724
VEPYNSIL T T FMVDNE
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNE 213
Score = 41.5 bits (93), Expect = 9e-04
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 676 THTPL--STLTVLHGRQ*TIYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXX 846
THT L S T + + IYDI RR + TNLNR + I+SSI SL F+G
Sbjct: 197 THTTLEHSDCTFMVDNE-AIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALN 255
Query: 847 XGPPXXQNXXVPXP 888
Q VP P
Sbjct: 256 VDLTEFQTNLVPYP 269
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 284 bits (697), Expect = 6e-77
Identities = 132/206 (64%), Positives = 157/206 (76%), Gaps = 1/206 (0%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 289
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 649
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 650 VEPYNSILTPTHP*AL*LC-FMVDNE 724
VEPYNSILT L C FMVDNE
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDNE 210
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 664 LYPHTHTPLSTLTVLHGRQ*TIYDIXR-RISXLXAXLTNLNRFIGXIVSSIXXSLXFDGX 840
L HT LS + + + IYD+ R ++ +NLNR I +VSSI SL FDG
Sbjct: 192 LTTHTTLELSDCSFMVDNE-AIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGA 250
Query: 841 XXXGPPXXQNXXVPXP 888
Q VP P
Sbjct: 251 LNVDLNEFQTNLVPYP 266
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 254 bits (621), Expect = 9e-68
Identities = 121/185 (65%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Frame = +2
Query: 173 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 352
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 353 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 532
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 533 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL-TPTHP*AL*LCF 709
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL T T F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 710 MVDNE 724
MVDNE
Sbjct: 181 MVDNE 185
Score = 41.5 bits (93), Expect = 9e-04
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 676 THTPL--STLTVLHGRQ*TIYDIXRR-ISXLXAXLTNLNRFIGXIVSSIXXSLXFDGXXX 846
THT L S T + + IYDI RR + TNLNR + I+SSI SL F+G
Sbjct: 169 THTTLEHSDCTFMVDNE-AIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALN 227
Query: 847 XGPPXXQNXXVPXP 888
Q VP P
Sbjct: 228 VDLTEFQTNLVPYP 241
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 168 bits (409), Expect = 4e-42
Identities = 82/190 (43%), Positives = 114/190 (60%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 647 VVEPYNSILT 676
VVEPYN+ L+
Sbjct: 179 VVEPYNATLS 188
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 167 bits (406), Expect = 1e-41
Identities = 82/190 (43%), Positives = 115/190 (60%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 647 VVEPYNSILT 676
VVEPYN+ L+
Sbjct: 179 VVEPYNATLS 188
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 166 bits (403), Expect = 2e-41
Identities = 81/190 (42%), Positives = 115/190 (60%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 647 VVEPYNSILT 676
VVEPYN+ L+
Sbjct: 179 VVEPYNATLS 188
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 164 bits (399), Expect = 7e-41
Identities = 80/190 (42%), Positives = 114/190 (60%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 647 VVEPYNSILT 676
VVEPYN+ L+
Sbjct: 179 VVEPYNATLS 188
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 164 bits (399), Expect = 7e-41
Identities = 80/190 (42%), Positives = 114/190 (60%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 647 VVEPYNSILT 676
VVEPYN+ L+
Sbjct: 179 VVEPYNATLS 188
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 163 bits (397), Expect = 1e-40
Identities = 79/190 (41%), Positives = 111/190 (58%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 647 VVEPYNSILT 676
VVEPYN+ L+
Sbjct: 179 VVEPYNATLS 188
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 149 bits (360), Expect = 4e-36
Identities = 77/193 (39%), Positives = 110/193 (56%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 647 VVEPYNSILTPTH 685
VVEPYN+IL+ H
Sbjct: 179 VVEPYNAILSMPH 191
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 149 bits (360), Expect = 4e-36
Identities = 77/193 (39%), Positives = 110/193 (56%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 286
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 466
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 467 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 646
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 647 VVEPYNSILTPTH 685
VVEPYN+IL+ H
Sbjct: 179 VVEPYNAILSMPH 191
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 93.5 bits (222), Expect = 2e-19
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Frame = +2
Query: 119 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 298
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 299 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 469
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 646
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 647 VVEPYNSILT 676
VV PYN +L+
Sbjct: 184 VVHPYNWVLS 193
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 93.5 bits (222), Expect = 2e-19
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Frame = +2
Query: 119 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 298
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 299 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 469
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 470 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 646
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 647 VVEPYNSILT 676
VV PYN +L+
Sbjct: 184 VVHPYNWVLS 193
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 135 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 290
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 149 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 328
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 329 VDE 337
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 149 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 328
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 329 VDE 337
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 149 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 328
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 329 VDE 337
DE
Sbjct: 116 ADE 118
>U80031-5|AAB37615.1| 547|Caenorhabditis elegans Hypothetical
protein B0554.2 protein.
Length = 547
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = -2
Query: 807 GDNXSDETIQVG*VGXQXXDTAXDVIDGSLSTMKHSQSAQGCVGVRIEL*GSTTAVET*G 628
GD + E +Q+G TA S+STMK + S V++EL G+TT +E G
Sbjct: 324 GDGMNPE-VQIGVTYTDFMTTATPGTMDSVSTMKITCSGIAGYNVQMELDGNTTPLENAG 382
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 640 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 461
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 460 NQI 452
Q+
Sbjct: 491 KQV 493
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 397 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 302
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,222,899
Number of Sequences: 27780
Number of extensions: 408236
Number of successful extensions: 1048
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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