Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_P21
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0368 + 2860640-2860855,2860959-2862203 33 0.38
08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534 32 0.50
05_04_0331 + 20317482-20318174,20318518-20318685,20318773-203188... 32 0.66
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166... 31 0.87
06_03_0556 - 22097423-22097445,22097579-22097613,22097873-220979... 31 0.87
02_01_0237 - 1570395-1571225,1572225-1572245,1572336-1572506,157... 31 0.87
01_01_0838 - 6536654-6536896 31 1.1
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 31 1.5
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 30 2.0
01_06_0921 - 33017892-33018953 30 2.0
11_01_0281 + 2086674-2087652,2089200-2089483 30 2.7
02_05_0021 - 25101738-25101881,25119662-25120331,25122562-251237... 30 2.7
06_03_1089 - 27521291-27522124 29 4.6
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291... 29 6.1
02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777 29 6.1
09_02_0255 + 6338611-6338655,6338694-6338909 28 8.1
04_03_0473 - 16332870-16332947,16333013-16333474,16333615-163337... 28 8.1
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 28 8.1
>03_01_0368 + 2860640-2860855,2860959-2862203
Length = 486
Score = 32.7 bits (71), Expect = 0.38
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +1
Query: 124 FAPFTSSSNSIIASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGD------ASDD 285
FAP T S S + A A AG T+ SGGA A+ L G+ AS+D
Sbjct: 341 FAPATGKSPSAASESRKVAPGGAMEERMAAGEAKTDASGGAMAERLAAGEAKTAAAASED 400
Query: 286 EKDMSAADAEG 318
E +A A G
Sbjct: 401 ENQAAAGGAAG 411
>08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534
Length = 369
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +1
Query: 136 TSSSNSIIASGALAAGTIASP---WSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAA 306
+SSS+S + AGT ++ G G+GG H + + S
Sbjct: 21 SSSSSSKGGGRVVTAGTTTMDTGGYNNGGGGGGGGGNGGGGGDHQESSSSGGGGGQSSRL 80
Query: 307 DAEGVWSPDIEQSFQEALAIYPP 375
A G W P + +E +A+Y P
Sbjct: 81 AARGHWRPAEDAKLRELVALYGP 103
>05_04_0331 +
20317482-20318174,20318518-20318685,20318773-20318895,
20319094-20319165,20321217-20321431,20321521-20321593,
20322092-20322568,20322970-20323077,20323184-20323192,
20323193-20323552
Length = 765
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 160 ASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADA 312
A G TIA + GA D+ +G A GDA D E+D D+
Sbjct: 155 AVGGAQGSTIAGDQADARGAQDSTAAGDAQDSTTAAGDAHDSEEDFGDYDS 205
>08_02_0909 -
22515326-22515418,22515992-22516150,22516583-22516658,
22517980-22518141,22518826-22519259,22519723-22521414
Length = 871
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 157 IASGALAAGTIASPWSTPAGAPDTNGSGGADA 252
+ASGA+A+G +ASP +TPA + G+ GA +
Sbjct: 48 LASGAVASG-VASPTTTPASSAPAAGADGASS 78
>06_03_0556 -
22097423-22097445,22097579-22097613,22097873-22097941,
22113969-22114807
Length = 321
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 154 IIASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 309
++A + G +A T D +D K ++ GD+SDDE D++ A+
Sbjct: 96 VVAPVGIQPGGVADEGETVGAIVDEMEREDSDNKRVEEGDSSDDETDINPAE 147
>02_01_0237 -
1570395-1571225,1572225-1572245,1572336-1572506,
1572942-1573070,1574364-1574657
Length = 481
Score = 31.5 bits (68), Expect = 0.87
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +1
Query: 229 NGSGGADAKHLDVGDASDDEKDMSAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDE 408
NG GGADAK D + DD+ D D E + EQ A PP GR + +
Sbjct: 31 NGRGGADAKE-DYLNWDDDDDDDEDEDEE---EEEAEQVMAWAAKCRPPAGRNVVNVDSF 86
Query: 409 G 411
G
Sbjct: 87 G 87
>01_01_0838 - 6536654-6536896
Length = 80
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 448 IKLRTGKTRTRKQVSSHIQVLARRKLREIQAKLKVQ--FWQPGLQAG--TSQDVKPFPGA 615
I+ +G R R+ + R++ + KL+VQ + +PG QAG +D P P
Sbjct: 9 IRRSSGPRRRRRLQPEEHKSPRSREIDRSETKLRVQIDYREPGRQAGPEIDRDAAPEPRT 68
Query: 616 GYKGVP 633
G+ G P
Sbjct: 69 GHMGTP 74
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 214 GAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEG 318
G P+ NG GG+D D G DD++D D EG
Sbjct: 108 GDPEANGEGGSDD---DDGGEDDDDEDEDGDDDEG 139
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 127 APFTSSSNSIIASGALAAG--TIASPWSTPAGAPDTNGSGGADAKHL--DVGDASDDEKD 294
AP +SS+ +I AG ++ SP +TP+ A + NGS DA + V + + KD
Sbjct: 577 APASSSALDLIKKKLQDAGASSVPSPLATPSSASELNGSKTTDAAPMGHQVSISGEKSKD 636
Query: 295 MS 300
S
Sbjct: 637 NS 638
>01_06_0921 - 33017892-33018953
Length = 353
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 154 IIASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 309
++A + G +A T D +D + ++ GD+SDDE D++ A+
Sbjct: 96 VVAPVGIQPGGVADEGETVGAIVDEMEKEDSDNERVEEGDSSDDETDINPAE 147
>11_01_0281 + 2086674-2087652,2089200-2089483
Length = 420
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 130 PFTSSSNSIIASGALAAGTIASPWSTPAGAPDTNGSG--GADAKHLDVGDASDDEKDMSA 303
P T +S S + ALAA + S A PD +G+ G KH+ + K
Sbjct: 49 PDTPASASPFSDAALAADASDADASAVAAPPDDDGTNPLGGAMKHMALAPPPPPNKKSKK 108
Query: 304 ADAEGVWS 327
++ VW+
Sbjct: 109 KNSNSVWT 116
>02_05_0021 -
25101738-25101881,25119662-25120331,25122562-25123779,
25123859-25124109
Length = 760
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 154 IIASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 309
++A + G +A T D +D + ++ GD+SDDE D++ A+
Sbjct: 637 VVAPVGIQLGGVADEGETVGAIVDEMEREDSDNERVEEGDSSDDETDINPAE 688
>06_03_1089 - 27521291-27522124
Length = 277
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 130 PFTSSSNSIIASGALAAGTIASPWSTPAGAPDTNGSGGADAK 255
P TSSS+S A+ A AA + ASP ++P P AD +
Sbjct: 153 PPTSSSSSQAAAAAAAATSPASPAASPTPPPPPPTERSADVR 194
>05_04_0191 +
18927302-18927707,18928747-18928979,18929062-18929127,
18929262-18929340,18929935-18930014,18930099-18930122,
18930254-18930375,18930902-18931109,18931960-18932006,
18932914-18932998,18933292-18933355,18933488-18933609
Length = 511
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 136 TSSSNSIIASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDA---SDDEKDMSAA 306
+ SS+ +S + AAG+ +S S + + G GG D +D GDA DD D + A
Sbjct: 30 SGSSSPSSSSSSSAAGSSSSS-SGASSSSGGGGGGGEDEDGVDQGDARGYDDDPFDGAPA 88
Query: 307 DAEG 318
A G
Sbjct: 89 RAAG 92
>02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777
Length = 778
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 622 CSPHRGKASHPVMCRLVGLAAKIAL 548
C+P ASHP+ CR + L +AL
Sbjct: 92 CAPAAAAASHPLRCRALELCFNVAL 116
>09_02_0255 + 6338611-6338655,6338694-6338909
Length = 86
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 190 ASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAA 306
AS P G+P+ +GS G + D +D+E++ +AA
Sbjct: 22 ASAAVQPEGSPEASGSAGFGSAEAGDDDDNDEEEEAAAA 60
>04_03_0473 -
16332870-16332947,16333013-16333474,16333615-16333739,
16333953-16334022
Length = 244
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Frame = +1
Query: 298 SAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT 477
S ++ E + +AL GR + I SD +G + ++Y K + K
Sbjct: 74 SQSEVESALKRREDDILTKALGTKEHPGRTRGIGSDVPWKHGLPQYSSQYRKRKVSKEER 133
Query: 478 RKQVSSHIQVLARRKLR-----EIQAKLKVQFWQPGLQAGTSQDVKPFPGAGYKGVPVSE 642
++ + ++V ++L ++ ++K + GT+ V P P A + P
Sbjct: 134 DTRLKAELKVEVIQELEASMNARVEERVKKVLADMNIPRGTTPAVHPIPRAQHDASPSQH 193
Query: 643 ASXC 654
S C
Sbjct: 194 RSSC 197
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 202 STPAGAPDTNGSGGADAK-HLDVGDA-SDDEKDMSAADAEG--VWSPDIEQSFQEALAIY 369
S P+GAP G GG ++ ++ GD+ D D A D +G V D + + +EA A
Sbjct: 551 SCPSGAPHRGGGGGGGSRAGMEGGDSVLDAVLDEEALDYDGDDVEMADADDAVEEAQAQE 610
Query: 370 PP 375
P
Sbjct: 611 DP 612
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,806,494
Number of Sequences: 37544
Number of extensions: 388995
Number of successful extensions: 1627
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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